Pantoea eucrina: LAC65_08460
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Entry
LAC65_08460 CDS
T07862
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
per
Pantoea eucrina
Brite
KEGG Orthology (KO) [BR:
per00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
per03016
]
LAC65_08460 (rnd)
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LAC65_08460 (rnd)
Transfer RNA biogenesis [BR:
per03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LAC65_08460 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
UBB11889
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All DBs
Position
complement(1801053..1802174)
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AA seq
373 aa
AA seq
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MNYTLIDQDHQLADVCRLARQHDAVALDTEFVRTRTYYPQLGLIQLFDGEQLVLIDPLPI
GDWTPFIGLLQDTQVTKFLHAGGEDLEVFLHRFGCLPQPMIDTQILAAFSGQPLSWGFAA
MVNHFNQIELDKSEARTDWLARPLTERQCQYAAADVAYLLPIARELMAQTEAAGNMKAAL
SECDMLCQRRLDILQPEEAWRDITNAWQLRPRQLAALQRLAAWRLKVARQKDMAVNFVVR
EENLWKVARYLPGSLGELDHLGLNGHEIRFHGKAMIDQVAEAQAQDEATLPAPLPNLIEH
PHYKQVFKAIKALVQQVSEETGYGQELLASRRQINQVLSVFWGLKSANRPPELLNGWRGE
LLKPGIDKILQAL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaattacaccctgatcgaccaagaccaccagctggctgacgtgtgccgcctggctcgc
cagcatgatgctgttgctctggatactgaatttgtacgtacccggacctactatcctcag
ctcgggctgattcagctgtttgatggcgaacagctggttctgatcgatccactgccgatt
ggtgactggacgccgtttatcggcctgctgcaggatacgcaggtgactaaattcctgcac
gccggaggcgaagatctggaagtctttctgcatcgctttggttgcctgccgcagccgatg
atcgatacgcagattctggccgccttttccggccagccgctctcctggggatttgcagcg
atggttaatcactttaaccagattgaactggataaaagtgaggcccgcaccgactggctt
gcgcgcccgctgaccgagcgtcagtgccagtatgccgcagcggatgtcgcctacctgctg
cctattgcccgtgagctgatggcgcagactgaagccgccggcaacatgaaagccgccctg
agcgagtgcgacatgctgtgtcagcgccggctcgatatattgcagcctgaagaggcgtgg
cgcgatattaccaacgcctggcagctgcgtccgcgccagctggccgcactgcagcgcctg
gcggcctggcgcctgaaggtcgcgcgtcagaaagatatggcggttaattttgtggtacgt
gaagaaaatttgtggaaggtcgctcgctatctgcccggcagcctcggtgaactggatcac
cttggactcaacggccatgaaatccgttttcacggtaaagcgatgattgatcaggtcgct
gaggcgcaggcacaggatgaggcaacgctaccggcaccgctgcccaatcttattgagcat
ccgcactataagcaggtctttaaagcgattaaagcgctggtacagcaggtaagcgaagaa
acgggatatggtcaggaactgctggcttcacgccgtcagattaatcaggttctcagcgtg
ttctgggggctgaaatcagcaaaccgtccacccgaactgctgaacggctggcgtggcgag
ctgctgaagccgggaatcgacaagattctgcaggcactttaa
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