Pantoea eucrina: LAC65_09755
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Entry
LAC65_09755 CDS
T07862
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
per
Pantoea eucrina
Pathway
per03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAC65_09755 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_09755 (sbcB)
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LAC65_09755 (sbcB)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LAC65_09755 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAC65_09755 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAC65_09755 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
DUF2738
Motif
Other DBs
NCBI-ProteinID:
UBB12123
LinkDB
All DBs
Position
2060130..2061551
Genome browser
AA seq
473 aa
AA seq
DB search
MPASEFTFLFHDYETFGKSPSLDRPAQFAGLRTDADFNPVGEPQVFYCQPADDYLPQPEA
VMITGITPQVARARGVTEAEFAARIHALFTQPNTCVIGYNNVRFDDEVTRNIFYRNFFDP
YGWSWQNGNSRWDLLDVMRACYALRPEGIVWPENDEGFPSFKLEHLTQANGVAHEQAHDA
MSDVWATLAMAKLVKEKQPKLYAFLFAHRNKQKLMTLIDIPQMKPLVHVSGMFGAARGNT
SWIVPLAWHPDNKNALIVADLAGDMTPLLELEPDALRERLYTRQSELGDAAPVPIKLVHI
NKCPVLAPASTLRPEDAERLGIDRQHCLANLALLRQHVAVREKVVTLFAEAEPFTPSEDV
DAQLYDGFFSDADRAGMNILRQTAPQNLPALDLTFNDARVNPLLFRYRARNFPGTLDDRE
QQRWLQHRREALNPERVQAFLLELESLASLHEEDADKMAQLKALYHYAQALVS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcctctgagttcacctttctgttccatgattatgaaaccttcgggaagagcccg
tcgctggatcgtccggcccagtttgccggcctgcgcaccgatgccgactttaacccggtg
ggtgaaccgcaagtgttctactgtcagcctgcagatgactatctgccgcagccggaagcg
gtgatgatcactggcattacgccgcaggttgcgcgcgcgcgcggcgttacggaagcggag
tttgctgcacgtatccacgcgctgtttacccagcccaatacctgcgtgatcggctataac
aacgtgcgctttgacgacgaagtcacgcgcaacatcttctaccgcaacttttttgatccc
tacggctggagctggcagaacggcaattcgcgctgggatctgctggatgtgatgcgcgcc
tgctatgcgctgcgcccggaagggattgtctggccggaaaatgatgagggctttcccagc
tttaagctggagcatctcacgcaagccaacggcgtggcgcacgaacaggcgcacgatgcg
atgtcggatgtatgggcgacgctggcgatggcaaaactggtcaaagagaagcagccaaag
ctgtatgcgtttctgtttgcgcatcgtaataagcagaagctgatgaccctgattgatatt
ccgcagatgaagccgctggttcacgtctccggtatgtttggcgccgcgcggggcaatacc
agctggatcgtgccgctggcgtggcatcctgataataaaaatgcgctgattgtggcggac
ctggcgggcgatatgacgccgctgctggagctggagccggatgcgctgcgcgagcgcctc
tatacgcggcagagcgaactgggcgatgcggctccggtgccgatcaagctggtgcacatc
aataaatgcccggtgctggccccggccagtacgctgcgcccggaggatgcggagcggctc
gggatcgatcgccagcactgtctggcgaacctcgccctgctgcgccagcacgtcgccgta
cgcgaaaaagtggtgacgctgtttgctgaagcggagccgtttacgccgtcggaggatgtt
gatgcgcagctctatgacggcttcttcagcgatgccgatcgcgccggcatgaatattctg
cgtcagacggcgccgcagaacctgcccgcgctggatcttacgtttaacgacgcgcgcgtc
aatccgctgctgttccgctaccgggcgcgtaatttccccggcaccctcgacgatcgcgag
cagcagcgctggctgcagcatcgccgcgaagcgttaaatccagagcgggtacaggcgttt
ctgctggagctggagtcgctcgccagcctgcacgaagaggatgcggataagatggcgcag
ctgaaagcgctctatcactacgctcaggcgctggtctcctga
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integrated database retrieval system
