Pantoea eucrina: LAC65_11840
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Entry
LAC65_11840 CDS
T07862
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
per
Pantoea eucrina
Pathway
per03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LAC65_11840 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_11840 (xseA)
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LAC65_11840 (xseA)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LAC65_11840 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Glyco_tran_WecG
DmmA-like_N
Motif
Other DBs
NCBI-ProteinID:
UBB12503
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All DBs
Position
2478610..2479983
Genome browser
AA seq
457 aa
AA seq
DB search
MSLPATANIFTVSRLNTTVRTLLENEMGLVWLSAEISNFTQPASGHWYFTLKDDGAQVRC
AMFRNSNRRVTFRPQHGQQVLVRASVTLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKAQ
LSAEGLFDQQFKQPLPDPARQVGVITSATGAALHDVLRVLHRRDPSLPVVIYPTVVQGAD
APAAIVRAIGLANQRNECDVLIVGRGGGSLEDLWCFNDERVARAIFASRLPVVSAVGHET
DVTIADFVADLRAPTPSAAAEIVSRNQVELLRQLQSQQQRMEMAMDYYLAGQQRYLTQLQ
HRLQQQHPQLRLARQQTALFQLQRRLGAAADRQLRSAQRQQDRLLQRLSAQQPQGRILRA
QQQLAHWHYRLQQSMQQQLGQDRQRFGTLMAQLEGVSPLATLARGFSVTTDAQGEVVKQI
APLQPGDRLRTRLEDGWVESEVTALTPLKRRRKPRQS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgcaaccgccaatatttttaccgtcagccgcctcaacaccacggtgcgc
acgctgctggaaaatgagatgggcctggtgtggctcagcgctgagatctccaatttcacg
cagcccgcgtccggccactggtacttcacgctgaaagatgatggtgcccaggtgcgctgt
gcgatgttccgcaacagcaaccggcgcgtgacgttccggccgcagcacgggcagcaggtg
ctggtgcgggccagcgtcacgctgtatgagccgcgcggcgactatcagttaatcattgaa
agcatgcatccggcgggtgaaggcctgctgcagcagcagtttgagcagctgaaagcgcag
ctcagcgcagaagggttgttcgatcagcagttcaaacagccgctgcccgatccggcccgt
caggtcggggtgatcacctccgcaaccggcgccgcgctgcatgatgtgctgcgcgtgctg
caccgccgcgatccctcactcccggtggttatctaccctaccgtggtgcagggagccgat
gcgcccgctgccatcgtgcgcgctatcgggctggccaaccagcgcaatgaatgtgacgtg
ctgattgtcggccgcggcggcggttcgctggaagatctctggtgcttcaacgatgagcgc
gtggcgcgggcgatttttgccagccgcctgccggtggtcagcgccgtagggcatgaaacg
gatgtcaccatcgccgattttgtcgccgacctgcgcgcgcccacgccctctgccgccgct
gagattgtcagccgcaatcaggtcgagctgctgcggcagctgcagtcgcagcagcagcgc
atggagatggcgatggactactatctcgccgggcagcagcgttacctcacgcagcttcag
catcgcctgcagcagcagcatccgcagctgcgcctggcacggcagcagaccgccctgttt
cagctgcagcgtcgcttaggcgcggccgccgatcggcagctgcgcagcgcgcagcgccag
caggatcggctgctgcagcggctcagtgcgcagcagccacaggggcgcatcctgcgcgcg
cagcagcagcttgcgcactggcactaccgtctgcagcagagcatgcagcagcagctgggg
caggatcgccagcgctttggtacgctgatggcgcagctggaaggggtcagtccgctggcg
acgctggcgcgcggcttcagcgttaccaccgatgcgcagggcgaagttgtaaaacagatc
gcgccgctgcagccaggcgacaggctgcgcacccggctggaagatggctgggtggagagc
gaagtcaccgccctcacgccgctgaaacgccgccgtaaaccccgccaatcctga
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