Pantoea eucrina: LAC65_12045
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Entry
LAC65_12045 CDS
T07862
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
per
Pantoea eucrina
Pathway
per03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LAC65_12045 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
per03019
]
LAC65_12045 (rnc)
03009 Ribosome biogenesis [BR:
per03009
]
LAC65_12045 (rnc)
03036 Chromosome and associated proteins [BR:
per03036
]
LAC65_12045 (rnc)
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LAC65_12045 (rnc)
Messenger RNA biogenesis [BR:
per03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LAC65_12045 (rnc)
Ribosome biogenesis [BR:
per03009
]
Eukaryotic type
90S particles
RNase
LAC65_12045 (rnc)
Prokaryotic type
rRNA processing factors
LAC65_12045 (rnc)
Chromosome and associated proteins [BR:
per03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LAC65_12045 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UBB12543
LinkDB
All DBs
Position
complement(2524771..2525451)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILITKLQRKLGYTFTHPELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSNIQTVEKLILDWYLNRLEQISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMADPVVGVGSSRRKAEQAAAEQALIKLGLE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccattctcattactaagctgcagcgcaaactgggctacacttttactcatccg
gaacttttgcagcaggccctgacacaccgcagcgccagcagcaagcataacgaacggctt
gaatttttaggcgattcaattctcagctatgtgattgccaacgcgctttatcaccgcttc
ccgcgcgtggacgaaggcgatatgagccgcatgcgcgccacgctggtgcgcggcaatacg
ctggctgagatggcgcgtgagtttgaactgggcgagtgcctgcgtcttggaccaggcgaa
ctgaaaagcggcggcttccgtcgcgagtcgatccttgcggatacggtagaggcgctgatt
ggcggcatcttcctcgacagtaatatccagaccgttgagaagctgattctcgactggtat
ctgaaccgtctggagcagataagcccgggcgataaacagaaagatcccaaaacgcgcctg
caggagtatctgcagggtcgccatctgccgctgccttcctatctggtggtgcaggtgcgg
ggcgaagcgcacgaccaggagttcaccattcactgtcaggtgagtggcatggccgatccg
gtcgtgggcgtaggctccagccgccgcaaagcggaacaggctgccgccgaacaggcttta
attaagcttggactcgaataa
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