Pantoea eucrina: LAC65_12085
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Entry
LAC65_12085 CDS
T07862
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
per
Pantoea eucrina
Brite
KEGG Orthology (KO) [BR:
per00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
per03009
]
LAC65_12085 (srmB)
Enzymes [BR:
per01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LAC65_12085 (srmB)
Ribosome biogenesis [BR:
per03009
]
Prokaryotic type
rRNA helicases
LAC65_12085 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_11
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UBB12551
LinkDB
All DBs
Position
2532493..2533821
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAEAIPAALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMVDMGFAQDIETIAGETRW
RKQTLLFSATLEGEHIKDFAERLLNDPVAIEADPSKSERKRIQQWYYRADNLEHKTKLLV
HLLKQPEVKRAIVFVRKRERLHELVTWMHEAGLRSSYLEGEMVQANRNEAIKRINDGRVN
VLVATDVAARGIDIDDVTHVINFDLPRTADTYLHRIGRTGRAGRKGIAISLVEAHDHVLL
GKISRYVNEPLKSRVIDELRPESRAPSAKVTGKPSKKALAKRKEKKEKEDEKPRVKKRHR
DTKNVGKRRKPSGSTTPESGAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaccacattctccgaactcgaactcgacgaaagcctgctggatgccctgcag
gaaaaaggcttcacgcgcccgacggccattcaggctgaagccattcctgccgcgctggaa
ggccgtgacgtgttaggttcggcacccaccggaacggggaaaaccgccgcctatctgctg
cccgcattacagcatctgctggacttcccgcgtaagaagtcgggtccgccgcgtatcctg
atcctcacccctacccgcgaactggcgatgcaggtggccgatcaggcgcgtgagctggcg
aagcatacccatctggatatcgccaccatcaccggcggcgttgcctatatgaaccacgct
gaagtcttcagcgaaaatcaggatattgtggtggcgaccaccggccgtctgctgcagtac
atcaaagaagagaactttgactgccgcgcggtagaaacactgattctcgatgaggcggac
cgcatggtcgatatgggctttgcccaggatatcgagaccatcgccggtgagacgcgctgg
cgcaaacagacgctgctcttctccgccacgctggaaggcgagcacatcaaagattttgct
gaacgcctgctcaacgatccggtcgcgattgaagccgacccgagcaaaagcgaacgcaaa
cgcattcagcagtggtactaccgtgctgataaccttgagcacaagaccaaactgctggtg
cacctgttaaagcagccggaagtgaagcgtgcgattgtgtttgtgcgcaagcgtgaacgt
ctgcacgagctggtgacctggatgcatgaagcgggcctgcgcagcagctacctcgaaggt
gagatggtacaggcgaaccgtaatgaagcgattaaacgcatcaacgatggtcgcgtcaat
gtgctggttgccactgacgttgcggcgcgcggtatcgatattgatgacgtgactcacgtg
atcaactttgacctgccgcgtacggcagatacctatctgcaccgcattggccgtaccggc
cgcgccggacgcaaagggatcgctatctcgctggttgaggcgcacgatcacgttctgctg
ggtaaaatcagccgctacgttaatgagccgctgaaatcacgcgtgattgatgagctgcgt
cctgagtcgcgtgcgccgagtgctaaagtcaccggaaagccgtcgaaaaaggcgcttgcc
aaacgcaaagagaagaaagagaaagaagacgaaaagccgcgcgtgaaaaaacgccatcgt
gacaccaaaaacgtgggtaaacgccgcaagccaagcggatcaaccacgccggagtcaggt
gcggaataa
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