Pantoea eucrina: LAC65_12775
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Entry
LAC65_12775 CDS
T07862
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
per
Pantoea eucrina
Pathway
per03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAC65_12775 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_12775 (recB)
Enzymes [BR:
per01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LAC65_12775 (recB)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAC65_12775 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UBB12661
LinkDB
All DBs
Position
complement(2674102..2677644)
Genome browser
AA seq
1180 aa
AA seq
DB search
MSQRAESLNPLTLPLRGERLIEASAGTGKTFTIGLLYLRLLLGLGEENAYSRPLSVEEIL
VVTFTEAATAELRGRIRANIHALRLACIRGVSSDAMLTALLQAIPQREEAASLLLAAERQ
MDEAAIFTIHGFCQRMLNLNAFESGMLFEQQLIEDEHPLLRQATADFWRRHCYPLTLDIA
RVIVTEWLGPEQLLATLRPWLQGESPSLRLPPDDQETLASRHARNMARIAEIKAQWRTLG
DDVQTLVEQSGVDKRSYSSKHLPAWVSKVSQWAHSDSSDYQVPPELARFGQRILDEKTKK
GDAPRHALFSAIDAFLAEPLSLRDVVIARALTEVREAVHKQKRLQALLGFDDLLSRLDDA
LQQAGGAQLAQLIRQRYPVALIDEFQDTDPQQYRIFRTLYMHQPEHALLLIGDPKQAIYA
FRGADIFTYIRARNEIAAHYTLDTNWRSSPAMVESVNQLFSRLPAPFLFAEIPFLPVQFA
PPNQALSLKAEGREQPALRFWLQPGSGASVSEYQQQMAKQCAMDISRWLQAGQQGEAMLG
KGPALRPVQASDITVLVRSRNEANQIREALAQLAIPSVYLSNRDSVYTTPEARELLWLLR
AILAPEQERMLRTALATSLFALDAAQLDALDRDARGWDTLVDTFARWQRLWHQRGVLPML
REIMLERQLAENMLASENGERRLTDLLHLGELLQEAASQLDSPHALVRYLAQQIARPDSQ
SASQQLRLESDRHLVQIVTIHKSKGLQYPLVWLPFAAGFREADIALYHDRDNFSAVLDLQ
GDEQSLALAEQERLAEDLRLLYVALTRSVYHCSIGVAPLFRGARKKEGESDLHKSALGYL
LQRGEAATAEQLGALLEALNGEGCEVVMADRAEAARWQVQAGVRDDLHARAISRQLAESW
RVTSYSGLQQHSAHRLLEVVPHFDLEAAGEEQQAATEEVVLTPHHFPRGAAPGTFLHELF
ESIDFTQPPGTELLEQHLQQNGYPLHWQPVLSSWIERVVTTPLNAQQIRLADVAARDRLI
EMEFYLPISALLTAPALDRLMRQHDPLSAQAPALNFSQVQGMLKGFIDLVFRRDGKYYLL
DYKSNWLGESHEAYTPDAMAQAMIDHRYDLQYQLYTLALHRFLQHRLPDYDYEQHMGGVF
YLFLRGMDGSSPDNGVFFTRPAAEFVTQLDSLFRGQGEDA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgtgctgaatccctcaatccgctgacgctgccgctgcgcggcgagcgcctg
attgaggcctctgccggtacgggtaaaacctttaccatcggcctgctttatctgcgtctg
ctgctggggctgggcgaagagaacgcttatagtcgcccgctctcggtagaagagattctg
gtggtgacgttcaccgaagcggcgacggcagagctgcgcggtcgtatccgcgcgaatatc
cacgcgctgcggctcgcctgtattcgcggcgtcagcagcgatgcgatgctgaccgcactg
ctgcaggcgatcccgcagcgggaagaggccgcctcgctgctgctggcggcggaaagacag
atggatgaagccgctattttcaccatccacggcttctgccagcgtatgctcaatcttaac
gcgtttgagtccggcatgctgtttgaacagcagctgattgaagatgagcatccgctcctg
cgtcaggcaacggctgatttctggcggcgtcactgctatccgctgacgctggatatcgcg
cgcgtgattgtcaccgaatggctggggccggaacagctgctggctaccctgcgcccgtgg
ctgcagggagagtcgccctcgctgcggctgccgccggatgaccaggagacgcttgcgtcg
cggcatgcacgtaatatggcgcgcatcgcggagatcaaagcgcagtggcgaacgctgggt
gatgacgtgcagacgctggttgagcagtcgggcgtggataagcgcagctacagcagcaaa
catctgcccgcctgggtcagtaaagtgagccagtgggcccatagcgacagcagtgattac
caggttccgcccgagctggcacgcttcgggcagcggatactggatgagaaaaccaaaaaa
ggcgacgccccgcggcacgcgctgttcagcgcaattgacgcgtttctggctgaaccgctg
tcgctgcgtgatgtggtcattgctcgggcgctgaccgaagtgcgtgaggcggtgcataaa
cagaagcggctgcaggcgctgctgggctttgacgatctgctgagccggcttgatgatgcg
ctgcagcaggcgggcggcgcgcagctggcgcagctgatccggcagcgctacccggtggcg
ctgatcgatgaatttcaggataccgatccgcagcagtaccggattttccgtacgctctat
atgcatcagcctgaacatgcgctactgctaataggcgatcccaaacaggcgatctacgct
ttccgcggggcggatatttttacctatatccgggcgcgtaatgaaattgcggcgcactat
acgctggacactaactggcgctcgtcacccgcgatggtagagagcgtaaaccagcttttc
tcgcgcttgccggctccctttctgtttgctgaaattccgtttttgccggtgcagtttgcg
ccgcctaaccaggcgctgtcgctaaaggcagagggcagagagcagcccgcgctgcgcttc
tggctgcagcccggcagcggtgccagcgtcagcgaatatcagcagcaaatggcaaagcag
tgcgcaatggatatcagccgctggctgcaggcggggcagcagggcgaggcgatgctggga
aaagggccggcgctgcggcccgtacaggcatcggatatcacggtgctggtgcgcagccgc
aacgaagcgaatcagatccgcgaagcgctggcgcagctcgcgatcccctcagtctatctc
tctaaccgcgacagcgtttacacgacaccggaagcgcgcgagctgctctggctgctgcgc
gctattctggctccggaacaggagcggatgctgcgtacggcgctggcgacttcgctattt
gcgctggatgcggctcagctggatgcgctcgatcgcgatgcgcgcggctgggacacgctg
gtagatacctttgcgcgctggcagcgcctctggcatcagcgcggtgtgttgccaatgctg
cgggaaattatgctggagcgccagctggccgaaaatatgctggcgtcggaaaatggcgag
cgccgcctgaccgatctgctgcatctgggggagctgctgcaggaagcggcatcgcagctt
gacagcccgcatgcgctggtacgttatctggcacagcagatagcgcggcccgacagtcag
tcggccagccagcagctgcgactggagagcgaccgccatctggtgcagatcgtcaccatc
cataaatccaaagggctgcagtatccgctggtctggctgccgtttgcagccgggttccgt
gaagcagatattgcgctttaccacgaccgcgataatttcagcgcggtgctggatttgcag
ggcgatgagcagagcctggcgctggcggaacaggagcgactggcagaagatcttcgcctg
ctttatgttgcgctgacgcgctctgtgtatcactgcagcatcggcgtggcgccgctgttt
cgcggcgcgcgcaaaaaagaaggcgagagcgacctgcataaaagtgcgctgggctatctg
ctgcagcgcggcgaagcggcgacggcagagcagctcggcgcgctgctggaagcgctgaac
ggcgaagggtgcgaggtggtgatggccgatcgtgctgaagccgcacgctggcaggtgcag
gctggcgtacgcgacgatctgcatgcacgcgcgatatcgcgccagctggctgaatcgtgg
cgcgtgaccagctattcaggtctgcagcagcacagcgcgcatcgcctgctggaggtggtg
ccccacttcgacctggaagcggcgggtgaagagcagcaggcggcgaccgaagaggttgtg
ctgacgccacatcattttccgcgcggtgccgcaccgggtacgtttctgcatgagctgttt
gagtcgatcgactttacccagccgccagggacggagctgctggagcagcatctgcagcag
aacggctacccgctgcactggcagccggtgctgagcagctggattgagcgggttgtgact
acgccgcttaatgcgcagcagatccggctggctgacgtggccgcacgcgaccgcctgatt
gagatggagttttatctgcctatcagcgctctgcttaccgctcccgcgctggaccggctg
atgcgccagcatgacccgctctctgcgcaggcgcccgcacttaacttcagtcaggtgcag
ggcatgctcaaaggctttatcgacctggtgtttcgccgggacggaaaatattacctgctg
gattataaatccaactggctgggggagagtcatgaagcctataccccggatgccatggca
caggcgatgattgaccatcgctacgatttgcagtatcagctctatacgctggcgctgcac
cggtttctgcagcaccggctgcccgattacgactatgagcagcatatgggcggcgtgttt
tatctgtttttgcgcggtatggatggcagttcgcctgataatggcgtctttttcacccgt
cctgccgctgaatttgtcacacaacttgatagcctgtttcgcgggcagggagaggatgca
tga
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