Pantoea eucrina: LAC65_12905
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Entry
LAC65_12905 CDS
T07862
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
per
Pantoea eucrina
Pathway
per03410
Base excision repair
per03430
Mismatch repair
per03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAC65_12905 (recJ)
03430 Mismatch repair
LAC65_12905 (recJ)
03440 Homologous recombination
LAC65_12905 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_12905 (recJ)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LAC65_12905 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LAC65_12905 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LAC65_12905 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
UBB14837
LinkDB
All DBs
Position
complement(2711158..2712882)
Genome browser
AA seq
574 aa
AA seq
DB search
MHTTELRRRTLPADASLPDDLPPLLRRLYLHRGVKTAAELERGAKYLLPWQSLGGIEAAV
ALLHRMLTGGQRIMVVGDFDADGATSTALTVLALRSMGGNVDYLVPNRFDDGYGLSPEVV
EQARARGAEMILTVDNGISSHAGVETASAHGIPVLITDHHLPGETLPAADAIVNPNLSDS
AFPSRALAGVGVAFYLMLALRAHLREQGWFTPQRSEPNLAAWLDLVALGTVADVVPLDAN
NRILVWQGLSRIRAGKCRAGIRALLEIANRDARQLAASDLGFAVGPRLNAAGRLDDMSVG
VALLLTEDIAQARMLASELDALNQTRKEIEQGMKSEALALCDALERQHSDLPLGLAFYHP
EWHQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSIAGLHLRDALERLDTLYPGLI
IKFGGHAMAAGLSLETDKYDAFRERFAALIDEWLDGEALQGVVWSDGELHAQEFSLHTAE
MLREAGPWGQAFPEPVFDGKFKLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTRLWP
DTSVRQVELAYKLDINEYRGNRSVQLIIDHIWPL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcacactacagaactgcgtcggcgcacgctgccggctgatgccagcctgcctgacgac
ctgccgcctctgctgcgccgtctctatctgcatcgcggcgttaaaaccgcagcagagctg
gagcgcggggcaaaatatctgctgccgtggcagagcctcggcggtatagaggctgcggtt
gcgctgctgcaccggatgcttacgggcggccagcgcattatggtcgtcggcgattttgac
gccgacggcgcgaccagcaccgcactgaccgtgctggcgctgcgcagcatgggcggcaac
gtggactacctggtgcctaaccgctttgacgatggctatggcctgagtccggaagtggtg
gagcaggcgcgtgcgcgcggcgcggagatgatcctcaccgtggataacggcatctcctcg
cacgcgggcgtcgaaacggcgtcagcgcacggcatcccggtcctgatcaccgatcaccat
ctgccgggcgaaacgctgccggccgccgacgctattgttaatcctaacctcagcgacagc
gcttttccgtcgcgcgcgctggcaggcgtcggcgtggcgttctacctgatgctggcgctg
cgcgcgcatctgcgcgagcagggctggtttaccccccagcgcagcgaacccaatctggcc
gcgtggctcgatctggtcgcgctcggcaccgtagcggacgtggtgccgctggatgcgaac
aatcgcattctggtgtggcaggggctgagccgcattcgcgccggtaaatgccgcgccggt
attcgggcgctgctggagatcgcaaaccgcgatgcgcgtcagctggcagccagcgatctc
ggctttgccgttggcccgcgtcttaacgcggcggggcggcttgacgatatgtcggttggc
gtggcgctcttgctgaccgaggatattgcgcaggcgcgcatgctggccagcgagctggat
gcgctgaaccagacgcgcaaagaaattgaacagggcatgaaaagcgaagcgctggcgctg
tgcgatgcgctggagcgtcagcatagcgacctgccgctgggcctggcattttatcacccc
gaatggcaccagggggtggtcgggatcctcgcatcgcgcctgaaagagcgttttcaccgg
ccggtcattgcgtttgcgcccgcgggcgatggcacgctaaaaggatcgggtcgctcaatc
gccggactgcacctgcgtgacgcgctggagcggctggatacgctctatccggggctgatt
atcaagttcggcggccatgcgatggcggcgggactctcgctggaaacggataagtatgac
gcgtttcgcgagcgctttgccgcgctgattgatgagtggctcgatggagaagcgctgcag
ggcgtggtctggtctgacggtgagctgcacgcgcaggagttcagcctgcataccgctgaa
atgctgcgtgaggcggggccgtggggacaggcattcccggaaccggtgtttgacggcaaa
tttaaactgctgcagcagcggctggtgggcgagcgtcacctgaaggtgatggtggaaccg
gtcggcggcggaccgttgctggacggtatcgcgtttaatgttgatacccgcctctggccg
gacaccagcgtgcggcaggttgagctggcctataagctggatatcaacgagtatcgcggt
aaccgttccgtgcagctgataatcgatcatatctggccgctctga
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