Pantoea eucrina: LAC65_15840
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Entry
LAC65_15840 CDS
T07862
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
per
Pantoea eucrina
Pathway
per03030
DNA replication
per03410
Base excision repair
per03420
Nucleotide excision repair
per03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
per00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAC65_15840 (polA)
03410 Base excision repair
LAC65_15840 (polA)
03420 Nucleotide excision repair
LAC65_15840 (polA)
03440 Homologous recombination
LAC65_15840 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
per03032
]
LAC65_15840 (polA)
03400 DNA repair and recombination proteins [BR:
per03400
]
LAC65_15840 (polA)
Enzymes [BR:
per01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAC65_15840 (polA)
DNA replication proteins [BR:
per03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAC65_15840 (polA)
DNA repair and recombination proteins [BR:
per03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAC65_15840 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAC65_15840 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
UBB13228
LinkDB
All DBs
Position
complement(3328160..3330943)
Genome browser
AA seq
927 aa
AA seq
DB search
MAKIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLMQYQPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIAPLHEMVKAMGLPLLAVSGVEADDVIGT
LALEAGKQGRSVLISTGDKDMAQLVTPEITLINTMSNTVLGPEEVEEKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMHAIYDNLDKVSGLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVPLEVSYDQLTVNQPDVETLQTLFARFEFRRWQADLQEGKWLQGK
KSNVQAQSALADEPEAAEATSVLSADGYVTILDEATFSAWLDKLKQAEVFAFDLETDSLD
TLSATIVGIAFAVAPGEAAYLPVAHDYLDAPDQLDRTDVLTKLKPLLEDERAAKVGQNLK
YDRGVLKNYGIELRGIRFDTMLESYCLNSVGGKHDMDSLSARWLNHKTVTFTEIAGKGKN
QLTFNQIALEQAAHYAAEDADVTLQLHQQMWPKLEQEAGPKQVFTDIEMPLVTVISRIER
NGVLIDQNILARHSQELTTRLSELELKAHELAGEPFNLSSTKQLQTILFEKQGIKPTKKT
PGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPQMINPVSGRVHTSYHQA
VTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAGADKRIVAADYSQIELRIMAHLSQDKG
LLEAFAQGEDIHRATAAEVFGAPLEKVSAEQRRSAKAINFGLIYGMSAFGLSRQLNIGAG
EAKKYMDLYFERYPGVLRYMEKTRDQAASKGYVETLDGRRLWLPDIKSSNAIRRKAAERA
AINAPMQGTAADIIKRAMIAVDGWLQQQNSDDVKMIMQVHDELVFEIHKDAVESASEKIR
QLMESSMSLDVPLLVEVGVGDNWDQAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatcgcagaaaatcccctgattctggtagacggatcctcttatctctaccgt
gcatatcatgcctttccgccactgaccaacagcgcgggcgaacctaccggcgcgatgtat
ggtgtgctcaacatgctgaaaagtctgttgatgcagtatcagcccagccatgtggctgtg
gtcttcgatgcgaaaggaaaaaccttccgcgacgaactgtttgaacactacaaatctcat
cgtccgccgatgcctgacgatctgcgtgcgcagatagcaccgctgcatgagatggtaaaa
gcgatggggctgccgctgctggctgtatcgggcgtggaggcagacgatgttatcggtacg
ctggcactggaagcgggcaaacaggggcgcagcgtactgatcagtaccggtgataaagat
atggcgcagctggtcacgccagagatcacactgatcaataccatgagcaataccgtactg
ggaccggaagaggttgaagagaaatatggtgtgccgccggcactgatcatcgattttctg
gcgatgatgggcgacagctccgataacattcccggcgtacccggcgtgggagagaagacc
gcacaggcgctgctgcaggggctgggtggtatgcacgccatttatgacaatctcgataaa
gtgtccggtctgtcattccgcggcgcgaaaaccatggcggctaaactcgaacagaaccgc
gatgtggcctttctctcttaccagctggcgaccattaaaaccgatgtgccactggaggtc
agttacgatcaactgacggtaaaccagcctgacgttgagacgctgcagacgctgtttgcc
cgctttgaattccggcgctggcaggccgatctgcaggaaggtaagtggctgcagggtaaa
aagagtaatgtgcaggcgcagagcgctctggctgatgagcctgaggctgcggaagctacc
agcgtgctctccgcggacgggtatgtcactatccttgatgaggcaacctttagcgcctgg
ctcgataagctgaagcaggctgaggtgtttgcattcgatctcgaaacggattcactcgat
acgcttagcgccaccattgtcggtatcgcgtttgctgtcgccccaggggaggctgcctac
ctgccggttgcgcatgactatctggacgcacccgatcagctcgatcgcactgacgtgctg
acgaaattaaagccgttgctggaggatgaacgcgcggcgaaagtggggcagaacctgaaa
tacgatcgcggcgtgctgaaaaattacggtattgagctgcgcggcatccggtttgacacc
atgctggagtcctactgcctgaacagcgttggcggcaagcatgatatggatagcctctct
gcgcgctggctgaatcacaagacggtcacgttcacagagatcgccggcaaaggtaaaaat
cagctcacgtttaaccaaatcgcgctggaacaggcggcacactatgcggcagaagatgcc
gatgtgacgctgcagctgcatcagcagatgtggccaaaactggagcaggaagcgggcccg
aaacaggtctttaccgatatcgaaatgcctctggttacggtgatttcgcgcattgagcgt
aacggtgtgcttatcgatcagaatatcctcgccagacattcgcaggagctgacgacccgc
ctctctgagctggaactgaaggcgcatgaactggcgggagagccgtttaacctctcttcc
accaaacagctgcagaccatcctgtttgaaaagcagggcatcaagcccacgaaaaagacg
ccgggcggcgcgccctcaaccagtgaagaggtgctggccgagctggcgcttgattatccg
ctgccaaaagtcatcctggaacatcgcgggctgtcgaagctgaaatctacctacaccgat
aaactgccgcagatgatcaatccggtctcaggacgcgttcacacctcttatcatcaggcg
gtcacggcgaccggccggctctcctcaaccgatccgaacctgcagaacattccggttcgc
aacgaagaagggcgccggatccgtcaggcctttgtcgccggtgcagataaacgcattgtt
gctgcggactattctcagattgagctgcgcatcatggcgcatctgtcgcaggataaaggt
ctgctggaggcctttgcgcagggagaagatattcaccgcgccacggcagcggaagtgttt
ggtgccccgctggaaaaggtctcagctgagcagcgccgcagcgccaaagcgattaacttc
ggcctgatttacggcatgagtgcgtttggcctctcgcgtcagctgaacatcggtgccggt
gaagcgaagaaatatatggatctctacttcgaacgctatccgggcgtactgcgctatatg
gaaaagacccgcgatcaggcggcgtctaaaggttacgtagagacgctggacgggcgtcgt
ctgtggctgccggatatcaaatccagcaacgctatccgccgcaaagccgctgagcgggcg
gccattaatgcgccgatgcagggcactgcagcggatatcatcaagcgggcgatgattgcc
gtggatggctggctgcagcagcagaacagtgatgatgtgaagatgatcatgcaggtacac
gatgaactggtatttgagatccataaagacgcggtagagagcgccagcgagaaaatccgt
cagctgatggagagcagtatgtcgctggatgtgccgctgctggtggaagtgggtgtcggt
gataactgggatcaggcgcactga
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