KEGG   Peredibacter sp. HCB2-198: ACJVC5_18455
Entry
ACJVC5_18455      CDS       T11927                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
perd  Peredibacter sp. HCB2-198
Pathway
perd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:perd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ACJVC5_18455 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:perd02044]
    ACJVC5_18455 (gspD)
Secretion system [BR:perd02044]
 Type II secretion system
  General secretion pathway protein
   ACJVC5_18455 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: XLJ78858
LinkDB
Position
3676520..3679042
AA seq 840 aa
MKTRCRNKRLMSTLIFTALLLSQYEAHAQFNKYRSQTRFNTNRGDGTPPADVQPASPSAS
DIESMSAEDAAAALKAAEKIESADADPDPTEVSDDDAFEPDSDDDANQTTFGNRPSPGLK
AQPKNSKYVNLNPETAFGPEIVESFDFPDTDIMEITKHMQKLTGINLILDKDVKGKVSII
APTPITVGDAWKAYLAALNMAGYSLIKTGAFYKVINARDIRYTPTKIYTGNYTPDTENYV
MRVISLKSVSAAEIARNFRPFMSRYGRIIDIKQTNTIIIADTGSNINRLAKMVKFLDVPG
HEESLQIVKVKNSSAQEIAKLLDNILKGGSSGAGARAGTATPRFTGSTGGGTESTSMISR
IIAEPRTNSIIAMANAEGAKQLRDLINKLDVKLISSGSNRVHVYYLNYGDSEELSKTLSS
IVTGATAKDGAAGGASRFTSFSGPSENPIFSAEVKITSDKNNNALVVTASPTDWLTLKDV
IGRLDIPRDQVYVEGLILEANVEKERSFGVEYVGAYGQGNAARAGFTSKSSSLLGLLSTG
VPTSLGGFFAGAGFGPTRTITVPNATGGGTTTQRVNALNAFIKAIVSHASTNVLATPQIL
ALDNTEATFEVGDTVPIQNSTISGTVQNFSTTNQEAKLSLKITPQINKVTRFVKLKINQK
IDDFKATSSENTGRGLPTTTRSAITEVMVRDRDTIAMGGLLRDREAVANAKVPILGDIPV
LGWLFKNKSRTIQKVNILFFMTPKILSPYAKTASANTKQVLERRAKGMKEMFDEDEQDPN
QKASEDLNKKLDAQIAGPLYDLSDADHYKNLNNEDIGPDQDAPAEEFETPDYQEIRKSVQ
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgaagacaagatgtcgtaataagcgtttgatgagcaccctcatttttaccgcccttcta
ctgtcgcaatatgaggcacacgcgcaatttaataaataccgttcgcagacgcgctttaat
acgaaccgtggagatggaactcctccggccgatgttcaacctgcttccccttctgccagt
gatattgaatcaatgtctgctgaagacgctgctgccgctttaaaggccgcagaaaaaatt
gaaagcgcggacgctgatccggatccaactgaagtttctgatgatgatgctttcgagcct
gatagtgatgacgatgccaaccaaacgacatttggtaaccgtccttctccaggtcttaag
gcccaacctaagaacagcaaatacgtgaatcttaacccagagaccgctttcggtcctgag
atcgttgagagttttgactttcctgatactgacatcatggaaatcacaaagcacatgcag
aagcttacagggatcaacctgatccttgataaagatgtaaaaggtaaagtttcaatcatc
gctcctactccaattactgtaggtgacgcttggaaagcttaccttgccgctcttaacatg
gccggctactcgctgatcaagactggtgctttctataaagtaatcaatgctcgtgatatt
cgttacactccgacgaagatctatactggtaactacactcctgacactgaaaactatgtg
atgagagtgatttctcttaaatcagtatcggccgctgaaattgcccgtaacttccgtccc
ttcatgtctcgatacggacgaatcattgatatcaagcaaaccaacactattatcattgcc
gataccggttcaaacattaaccgtctcgcaaagatggtgaagttcctggatgttccggga
cacgaagaatcacttcaaattgtgaaagtgaagaactcatcggcccaagagatcgcgaag
cttctggataatattcttaaaggtggttctagtggtgctggtgcgagagcaggtactgct
actccacgtttcactggctcaactggcggcggaacagagtcaaccagcatgatttctcga
atcatcgctgaacctagaacaaactcaattatcgccatggccaatgctgaaggagcgaaa
caacttcgcgacctgatcaacaagctagacgtaaagcttatttcttccggttctaaccgt
gttcacgtttactacttaaactacggtgactctgaagaactttctaaaacactttcaagc
atcgtgactggtgctactgccaaagatggtgctgctggtggtgcaagccgcttcacttct
ttctctggcccttctgagaacccgattttttctgctgaagtaaaaattacttcagataaa
aacaacaacgctctggttgtgacggcctcacccactgactggcttactcttaaagacgta
attggccgcttggatattcctcgtgaccaggtttatgtagaaggtcttattcttgaggcc
aacgtagaaaaagaaagatcattcggggtcgaatacgttggtgcttacggacaaggaaac
gcggcacgtgctggtttcaccagtaagtcttcaagtcttcttggtctcttaagtacaggt
gttccaacttcacttggtggtttcttcgccggcgctggttttggtccaactcgtacaatt
acagttccgaacgccactggtggtggtaccactactcaacgtgtgaatgctcttaacgct
ttcatcaaagcgattgtttctcacgccagcactaacgttctggccacgcctcagatcctg
gccctggataacacagaagcaacgttcgaagttggtgatacagtacctattcagaactct
acaatctccggtacggttcaaaacttctcgacaacaaaccaggaagcgaagctttcacta
aagatcactccacagatcaacaaagtgactcgtttcgtgaagcttaaaattaaccagaag
attgatgactttaaagcgacttcatctgaaaacactggccgcggtcttccaacgacgact
cgttctgctatcaccgaagtgatggtgcgtgaccgtgataccatcgccatgggcggtctc
cttcgtgaccgtgaggcagtggccaatgcgaaagttccaattctcggagatattcctgta
ctaggttggttatttaaaaacaaaagtagaacaatccagaaagtgaatattctgttcttc
atgacacccaaaattctttctccttatgctaaaactgcctcggccaacacgaaacaagtg
ttagaaagacgggccaaaggtatgaaggagatgtttgacgaggatgaacaagatcctaac
caaaaagcttcggaagacttaaataagaaactggatgcacaaattgccggacctctttac
gacttgtctgatgcggatcattataagaatctcaacaatgaagacattggtccagaccag
gacgctccagcagaagaattcgagactcctgactatcaagagattagaaaatcggtgcaa
taa

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