Peribacillus sp. R9-11: RE409_00030
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Entry
RE409_00030 CDS
T10247
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
peri Peribacillus sp. R9-11
Brite
Enzymes [BR:
peri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RE409_00030 (gyrB)
DNA replication proteins [BR:
peri03032
]
Prokaryotic type
DNA Topoisomerases
RE409_00030 (gyrB)
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RE409_00030 (gyrB)
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NCBI-ProteinID:
WMX58483
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Position
4706..6631
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AA seq
641 aa
AA seq
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MEQKEVQAQAYDENQIQVLEGLEAVRKRPGMYIGTTSAKGLHHLVWEIVDNSIDEALAGF
CTEIKVTIEEDNSITVVDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSTVLEVYVHREGKIHYQQFNRGVPREDLKIIGETDHTGTTVHFIPDPEI
FKESVEYDFDTLATRIRELAFLNKGLKLIIEDKREEEEKIKEYHYEGGIKSYVEHLNRSK
EVLHEEPIFMEGEKEGISVELALQYNDSYISNVFSFANNIHTYEGGTHESGFKTALTRVI
NDYARKNGLLKEADTNFSGEDVREGLTAIISIKHPEPQFEGQTKTKLGNSEVRTVTDSIL
SERLDSFLYENPSVARKIVDKGQMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSK
DPSISELYIVEGNSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILHNIEIGTIITA
LGTGIGDEFNIEKARYHKIVIMTDADVDGAHIRTLMLTFFYRYMRKIIEYGYIYIAQPPL
FKIQQGKRVEYAYNDRELEQIMAGLPSTPKPNLQRYKGLGEMNPEQLWETTMNPDTRTLL
QVSLKDAIEADETFEMLMGDKVEPRRNFIEENAIYVKNLDI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagaagtacaagctcaggcatacgatgagaatcagatacaggttttagaa
ggcttagaagcagttcgtaaacgtccggggatgtatatcggtactacctctgcaaaagga
cttcaccatcttgtttgggaaattgtcgataatagtattgatgaggcactagcaggtttc
tgtactgaaatcaaagtgacgatcgaagaagacaatagcataacagtagtcgataatggt
cggggaattccagtaggtatccatgaaaaaatgggacggccagcagtagaagtaatcatg
acggtccttcatgcgggcggtaaatttggcggcggaggttataaggtctccggtggtctg
catggtgtaggtgcttcagtagttaatgccctatccacggtattggaagtgtatgtacat
cgtgaaggtaaaatccactatcagcaatttaaccgaggggtccctagagaagatttgaaa
attattggggagaccgatcatacagggacaacagtacactttattccggatcctgaaatt
ttcaaggaatccgtggaatatgatttcgatacattagccacacgtatccgtgagcttgca
ttcttgaataaaggcttgaagctcatcattgaagataaacgtgaagaagaagagaaaatc
aaggaataccactacgagggcggtatcaaatcttatgttgagcatttgaatcgttcaaaa
gaagtccttcatgaggaaccgattttcatggaaggcgagaaagaaggtatatctgtcgaa
ttagctttgcaatataatgacagctatatcagtaacgttttttcctttgccaataatatt
catacgtatgaaggcggtacacatgaatcaggattcaagactgcgttgacacgggtcatc
aatgattatgcacggaaaaacgggctcttaaaagaggccgacaccaatttctctggtgaa
gatgttcgtgaagggttaacggcaattatttctattaagcatcctgaaccgcaatttgag
gggcaaaccaaaaccaaacttggaaactcagaagtaagaacggttactgattccattctt
tcggaaaggttggattccttcttatacgaaaatccttcagtggctagaaaaattgttgat
aaagggcaaatggcggcaagagctcgtttggcggccaagaaagcacgtgagttaactcga
agaaaaagtgccttggaagtctccagtctacctggtaaactggcagattgttcgtcgaag
gatccgtctatcagcgaattgtacattgtagaaggaaactcggctggtggctcagctaaa
cagggacgtgaccgccatttccaagctattctgccgctaaggggtaaaatcctaaatgtg
gaaaaggcgcgattggatagaatccttcataatatagaaattggtacaattattactgca
ctcggaacaggtattggcgatgaattcaatattgaaaaagctagataccataaaattgtt
atcatgaccgatgcggatgtagacggtgcccacattagaactttaatgttgacattcttc
tatcgctatatgcggaaaattatagagtatggttatatttatattgcccaaccacctctt
ttcaaaattcagcagggtaaacgagtggaatatgcctataatgaccgcgaactagaacaa
atcatggcgggtctgccaagcactcctaagcctaacttacagcgctataaagggttgggt
gaaatgaacccagagcaactatgggaaacaacaatgaaccctgatacgagaacgctactt
caagttagtttgaaagatgccattgaggcagatgaaactttcgaaatgttgatgggagat
aaagtagagccgcgtcgtaactttattgaggaaaatgcgatttatgtaaaaaacctcgat
atctga
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