Peribacillus sp. R9-11: RE409_00845
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Entry
RE409_00845 CDS
T10247
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RE409_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peri03021
]
RE409_00845
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_00845
Enzymes [BR:
peri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RE409_00845
Transcription machinery [BR:
peri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RE409_00845
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RE409_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Dockerin_1
DUF961
SAM_EPH
PASTA
Motif
Other DBs
NCBI-ProteinID:
WMX55879
LinkDB
All DBs
Position
151043..151987
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEINDDTKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTAIQIDG
VLHEFSTIEGVVEDVTSIILNVKKLALKIYSDEEKTLEIDVQGDGVITAADITHDSDVEI
LNPDLYIATIGKNGHMRMRLSARRGRGYTPAVQNKREDQPIGVIPIDALYTPVSRVSFQV
ENTRVGQLSNFDKLTFDVWTDGSTGPQEAVALGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELAHKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgaaatcaacgacgataccaaattc
ggtaaattcgtcgtagagccactagagcgtgggtatggtactacattgggtaactcctta
cgtcgtatccttttatcctcactcccaggtgctgctgtcacagctatacaaattgatgga
gtgctacatgagttctcaacaattgaaggcgtcgtagaggatgttacatctatcattctt
aatgtgaaaaaactagctctaaagatttactctgatgaagagaagacgctagaaattgac
gttcaaggtgacggagtcattacggctgctgatatcactcatgatagtgatgtagaaatt
cttaatccggatttatatattgctacaatcggtaaaaacggtcatatgcgtatgcgttta
tctgcacgtcgcggccgcggctacactcctgctgttcaaaacaagagagaagatcagcca
attggtgtaattccaatcgatgctctttacactccagtttcacgagtatctttccaagtt
gaaaatacacgtgttggacagttgtctaactttgacaagttaacgttcgatgtttggact
gatggcagtacgggtccgcaagaagcggtagcacttggagctaagattttaacagagcat
ttaaatatctttgttgggttaactgacgaagctcaaaatgctgaaatcatggttgaaaaa
gaagaggatcaaaaagaaaaagttcttgagatgacgatcgaagaattagacctttctgtt
cgttcttataactgcttgaagcgtgctggaatcaataccgttcaagagcttgctcacaaa
acggaagaagatatgatgaaagttcgtaatctaggccgtaaatcacttgaagaagtgaaa
gcgaaactagaagaattaggcttaggtcttcgtaaagacgactga
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