Peribacillus sp. R9-11: RE409_02080
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Entry
RE409_02080 CDS
T10247
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri03420
Nucleotide excision repair
peri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RE409_02080 (pcrA)
03430 Mismatch repair
RE409_02080 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_02080 (pcrA)
Enzymes [BR:
peri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE409_02080 (pcrA)
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE409_02080 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RE409_02080 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
WMX56066
LinkDB
All DBs
Position
424545..426794
Genome browser
AA seq
749 aa
AA seq
DB search
MQYLAEKLLIGLNEQQQKAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMVEKEIAPWNIL
AITFTNKAAREMKERIRSILGGASEDIWISTFHSMCVRILRRDIDRIGFNRNFSILDTTD
QQSVIKQIMKDRNMDTKKYDYRAILGSISSAKNELVGPEEYLKTASDYFTKVTADVYTEY
QKRLRKNSALDFDDLIMMTIQLFQLIPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFRNLCVVGDSDQSIYRWRGADIANILSFEKDYPNANMIFLEQNYRSTKKILEAANKVI
DNNRNRKPKNLWTENVDGNKIFYYRADNEQGEAQFVAGKINELAKDGSRKYSDIAILYRT
NAQSRVMEEVLLKSNINYAIVGGTKFYDRKEIKDLLAYLRLIANPDDDISLRRVINVPKR
GIGATSMDKVADYADQYDLSIYKALESVEMIGISGKATKAAREFHTLITNYTNQQEYLSV
TELVEEVIKKTGYREMLQAEKTIESQSRLENIDEFLSVTKAFESNSEDKSLIGFLTDLAL
VADIDQLDENSEEATNTVTLMTLHSAKGLEYPVVFLLGLEEGVFPHSRSLMDEEEMEEER
RLAYVGITRAENELFISNAQMRTLYGRTSMNPVSRFIGEIPEELLEDLKPKPAPRSKQTP
FSSPARTGNTATASTRKMPTFGRAVSAPSATGGEEIGWAVGDKASHKKWGIGTVVSVKGE
GEGKELDIAFPSPIGIKRLLAKFAPIEKA
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatttagcggaaaaattactaataggtttgaatgaacagcaacaaaaagcagta
aaagcaacagatggtccacttctaattatggctggggcaggaagtggaaagacgcgtgtg
ctgactcaccgtattgcttacttgatggttgaaaaggagatagcaccttggaatatcctt
gcaatcacatttactaataaagccgcacgtgaaatgaaagaaagaatccgtagcattctg
ggcggtgcgtccgaagatatctggatttcaacgttccactctatgtgtgtccgtattttg
cgaagagatattgatcggattggatttaataggaatttctcaattttagatacgacggat
cagcaatcagtcataaagcaaattatgaaagaccgtaatatggatacaaagaaatatgat
taccgggccattttaggtagtatcagttcagcaaaaaatgaattggtcggaccagaagaa
tacctcaaaactgcgtcagattattttactaaagtaacggcagatgtatatacagaatac
caaaaacgtttgcggaaaaattcagccctcgattttgatgatttgatcatgatgacgatt
caattgttccaacttataccggaagtgctagaatattatcagcggaagtttcaatacatt
catgttgatgagtatcaagatacaaaccgggctcaatatatgcttgttaaactgctagct
tcacgattccgtaatctctgtgttgtaggggattcagatcagtcgatctatcgctggcgc
ggtgcggatattgcgaatatcctttcatttgaaaaagattatcctaatgccaatatgatt
ttccttgaacagaattatcgttcaacgaaaaagattcttgaagcggcgaataaggtcatc
gataataatcgaaaccggaagccgaaaaatctttggactgagaatgtagatggtaataag
attttctattaccgtgcagacaatgaacaaggggaagcgcaatttgtagcaggaaagata
aatgaattagctaaggacggtagtagaaaatattccgatatagcaatcctttacagaaca
aatgcacaatcacgggtaatggaggaagttctgcttaaatccaatattaactatgcaatc
gtcggcggcactaagttctatgatcgtaaagagattaaggatttacttgcctatctgcgt
cttattgcaaatcctgatgatgacatcagtcttcgccgtgtaataaatgtaccgaaacga
ggtattggtgcaacttcaatggacaaagtagcagattatgcagatcaatatgatctttcc
atttataaagcacttgagtccgtggaaatgattgggataagcgggaaggctaccaaagca
gcaagggaattccacacgttaattactaactatacaaatcagcaggagtacttatctgtg
acggaactggtggaagaagtcattaaaaaaaccggttaccgtgagatgctgcaagcagaa
aaaacaattgaatcacaaagccgtcttgaaaatatagatgagtttttatctgtaacgaaa
gcattcgaaagtaacagcgaggacaaatcattgattggctttttaactgacctggcgttg
gttgctgatattgaccaattagatgagaactccgaagaagcaacaaatacggtaacgtta
atgacactacattcggcgaagggattagaatatccggtagtctttttactgggccttgaa
gaaggagttttccctcatagccgctcgctcatggatgaggaggagatggaagaagaacgc
cgtcttgcttatgtggggattacaagggctgaaaatgagttgttcatcagtaatgcccaa
atgcggacactgtatggacggacgagcatgaatccagtctcacggttcatcggagaaata
cccgaggaacttcttgaagatcttaaaccgaaacctgctcctagatccaagcagactcca
ttcagttctccggcgagaacagggaacactgcgacggcttccacaagaaaaatgcctacc
tttgggcgagctgtttctgccccatctgcaacaggcggtgaagagattggttgggccgtt
ggtgacaaggcttcccataaaaagtgggggattggaaccgtggtgagtgtaaaaggagaa
ggcgaaggaaaggaactggatattgcattcccaagtccaatcggcattaaacgcctattg
gcgaaatttgcaccaatagaaaaagcataa
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