Peribacillus sp. R9-11: RE409_06400
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Entry
RE409_06400 CDS
T10247
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
peri Peribacillus sp. R9-11
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
peri03019
]
RE409_06400 (yhaM)
Messenger RNA biogenesis [BR:
peri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RE409_06400 (yhaM)
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF2130
Motif
Other DBs
NCBI-ProteinID:
WMX56851
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All DBs
Position
1332421..1333359
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AA seq
312 aa
AA seq
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MGNGIIHYGIGEVVDIYMYIKTSTKAVASNGKPFLTLILSDKTGEIEAKLWDVSETDEKT
YSAEATVKVQGEVQNYRGRSQLKIRNIRLTADADGITKADLIQTAPLSQDEMMETITQFI
FEMRNPNIQRVTRHLIKKYQNEFLTFPAATKNHHEYMSGLAYHVVSMLGLAKAISSLYPS
LDKDLLYAGVILHDLGKVHELSGPVSTVYTVEGNLLGHITIMVNEVGKAAEELGIDAEEI
MILKHLILSHHGKAEWGSPKPPMVREAEVLHYIDNMDAKINMMDRALEKVKPGEFTERVF
ALDNRSFYKPTF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgggattattcactatggaattggtgaagtagtagatatatatatgtatatt
aaaacgagtacaaaggcggttgcgagtaatggaaagccgtttttgacactgattttgtct
gataaaactggggagattgaggctaagttatgggatgtctccgagactgatgagaaaaca
tacagtgcagaagctacggtgaaagttcagggggaagtccagaattatcgaggacgaagc
caattgaagatccgtaatattagacttactgcggatgctgatggcatcacaaaagcggat
ttgattcaaacggcacctttaagtcaggatgaaatgatggaaacgattactcaattcatt
ttcgaaatgaggaacccaaatatccaaagggtgaccagacaccttatcaaaaaatatcag
aatgaattcttgacgtttcctgctgctactaagaaccaccatgagtatatgtcaggactc
gcatatcacgttgtgtcgatgctgggattagctaaagccatttcaagcctatatccttcg
ctcgataaggatcttctttatgcaggggtcattctacatgaccttggaaaggtacatgaa
ctatctggacctgtgtcgactgtatatacggttgaaggtaaccttctaggccatatcacc
atcatggtaaatgaagtcggtaaagctgcagaggaattagggatcgatgcagaagaaatc
atgatcctcaagcacttaatattaagtcaccatggtaaagctgaatggggcagtcctaaa
ccaccaatggtaagggaagcagaagtacttcattatatagataacatggatgccaaaata
aatatgatggaccgggcattggaaaaagtaaaaccgggtgaatttacggaaagagtcttt
gcactcgataatcgttcattctataaaccaacattttaa
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