Peribacillus sp. R9-11: RE409_06590
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Entry
RE409_06590 CDS
T10247
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
peri Peribacillus sp. R9-11
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_06590 (addB)
Enzymes [BR:
peri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE409_06590 (addB)
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RE409_06590 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WMX56887
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All DBs
Position
1364504..1367995
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AA seq
1163 aa
AA seq
DB search
MSLRFLLGRSGAGKTSNVLDEIRSRLDKDPEGNPIIYLVPDQMTFLSEYKLIKTPGLAGM
IRTQVFSFSRLAWRVLQETGGMSRLHLDSVGVNMLIRKIMDDKKEDLKMFRRSADKQGFI
AQMEQILAEFKQYCIQPDDIQNYLTETSPGGNGIQDKLHDLELVYQAFEDEMIGKYLDSE
DYFTLLIEKMSESSYIRDADIYIDGFYSLTPQELLIVEEMMKLCKSVTIALTLDQPYRQY
APDDLQLFRQTGNLYHQLYQSGLRAGIPIAEDRILNGTARFGGSPGLNHLETYFAQRPAR
TFENPSEVTIAQAVNRRAEIEGVARNILTLVRQKQHRFRDIAILVRNGEAYEDILQTVFR
DYQIPLFVDSKRTMLNHPLIELIRSTLEIINGYWRYEPVFRAIKTELLFPLQKSHDRMRE
QVDKLENYVLARGIKGGKWTSKDRWTYRRFRGLELEDRAQTDKEMKLEQELNELKQLFTE
PILKLSKRVKKSQNGREICEALYLYLEELHVPEKLEKLKLEAEEAGDLVSAREHEQSWNA
VVDLLDQFVELLSEEELSMKQFAVIIEAGLESLEFSLVPPAIDQVLVANLDLSRLDDVKT
AFVIGLNEGVLPGKAVSDGVFSDSDRETLLASGLDVAPSSKVRLLDEEFTAYKAFTTPAE
ALYLSYPLADEEGKALLPSSYLKRVRDVLPHVTDSFYMNDPSDLSAEEQVKYAANYDVAL
SYLAAQLQLKKRNYPIHSLWWDVYNTIIEDEMVGPAAAKVLSSLFYQNKTKKLSEETSKQ
LYGESILTSVSRMEMFNSCPFSHYAAHGLKLRERQIFRLDAPDIGEMFHGALKMISDYLK
ENDIPWSSLTKEQCLELARNAVERLAPKLQNQILLSTNRHHYLRRKLEHVIGRASIVLSE
HAKVSGFAPIGLELGFGKNGELPPLSFTLKNGTEMELIGRIDRVDKAEEGEGVYLRVLDY
KSSEKELNMSEVYYGLALQMLTYLDIVVTHSHSLIGKEAIPAGVLYFHVHNPVVKSKGML
SLDKIDEEIYKSFKMNGLVLDHTNVIQMMDTSLDIETSSKSDIIPAGFKKDGSLLAASKV
ASREEFSLLNHHVRRVYQEAGDRMVDGDVDITPYKLKEKTPCTFCSFKSVCQFDQSLEEN
QFRNLAQKKQNDVLDLLRGEGER
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgttttttactaggaagatcgggtgcagggaaaacttcgaatgttttggac
gaaattcgctccagattggataaggaccccgaaggcaatccaataatttacctcgttcct
gatcagatgacgtttctatcggaatataaattaattaaaacgccaggcctcgctggaatg
atacggacacaggtattcagttttagtaggctagcttggcgcgttctgcaggaaactggc
ggaatgagccgtcttcatttggacagtgttggcgttaatatgttgatacgaaagattatg
gatgataaaaaagaagatttgaaaatgtttcgccgatctgctgataagcagggattcatt
gctcaaatggaacaaatactggctgaattcaagcaatattgcatccaaccggatgacatt
caaaactatttgaccgaaacatcaccgggaggcaatggaattcaggataaactacatgac
cttgaactggtttatcaggcttttgaggatgaaatgattggaaaatatttagattctgaa
gactattttactttacttatagaaaaaatgtcagagtcttcatatataagagacgcggat
atatacatcgatggtttttacagcttgacaccacaggaattattgattgtagaagaaatg
atgaagctgtgcaagagtgtaacaattgcgttgacattagatcagccctacagacaatat
gcgcctgatgatctgcagcttttcaggcaaacagggaatctgtatcatcagctttatcaa
tcgggattaagggctggaattccaatagcagaagatcgcatcctaaacggtacagcaagg
tttggtgggagtccggggctgaatcatctggaaacctattttgcccaacgtcctgcgcga
acttttgagaacccctctgaagtaacgattgctcaggcagttaaccgcagggctgaaatt
gaaggggtcgcccggaacatcttgacacttgtcagacaaaaacagcaccgctttcgggat
attgcgattttagttcgcaatggagaagcatacgaagatattttacaaacagtttttcgg
gattatcaaattccactgttcgtggattcaaaacgaactatgctcaatcatcccctgatt
gaactgattcgatcgacattggagatcataaatggctattggcgttatgaacctgtattt
cgggcaatcaaaacggagctactattcccgcttcaaaaaagccacgaccgaatgcgtgag
caggtagataagcttgaaaattatgtgcttgctcgtgggattaaaggaggtaagtggact
tctaaagatcgatggacctaccgccgcttccgtggactagagctcgaagaccgagcccaa
acggataaggaaatgaagctagagcaggaactgaatgagctgaagcaattatttactgag
cccattttgaagctctcaaaacgagtgaaaaagtctcaaaatggtagagaaatatgcgaa
gccctttatctatatcttgaagaattacatgtaccggaaaaattggaaaagctaaagctg
gaggccgaagaagcaggagatttggtttcagctagagagcatgaacaatcgtggaacgca
gtcgtcgacctgctagatcaattcgtcgagctgttaagcgaagaagagctttctatgaaa
cagtttgcggtaatcattgaagcaggtctggaatcccttgaattttctttagtaccgccg
gcaattgaccaagtccttgtcgctaatctcgatctatcacgtcttgatgatgttaagaca
gcttttgtcattggtctaaatgaaggggtcttgccaggaaaagctgtatctgatggagta
ttttccgatagtgatcgcgaaacgcttttggcaagtggacttgacgttgccccaagctcg
aaggttcgcctcttggatgaggagtttacagcgtataaagcatttactacaccggctgaa
gcgctctatttatcgtatccgcttgccgatgaggaaggaaaagctctcttaccctcttct
tatttaaagagggtaagggacgtcctgccgcacgttaccgattctttttatatgaacgac
ccatcggacctgtctgctgaggagcaggtgaagtatgccgcgaattatgatgtggccctg
tcttatctggctgcccaattgcagttgaaaaaacgaaactaccccatccattcactctgg
tgggatgtatacaataccattattgaagatgaaatggttggtcccgcagcagctaaggta
ttatcgagtcttttttaccaaaataaaacgaagaaattatctgaagaaacaagcaagcaa
ttatatggtgaaagcattcttacaagtgtatcgcggatggaaatgtttaatagctgcccg
ttttcccattacgctgctcatggtttgaaattaagggaaaggcagattttccgtctggat
gcaccggatattggtgaaatgttccatggagcgctaaaaatgatttcggattatttaaag
gaaaatgatattccttggtcttcattgacaaaagagcaatgcttggaattggctagaaac
gcagtggaaaggcttgctccaaagcttcaaaatcagattttgttaagtacgaaccgacat
cattatttgcgaaggaaattggaacatgtaattgggcgggcatcaatcgtcttaagtgaa
catgccaaggtgagcggatttgctccaataggattggaacttggcttcgggaaaaatgga
gagctgccgccgctttcgttcacactgaaaaacgggacggaaatggaattaattggacgg
attgatcgcgttgataaagcggaagaaggtgagggtgtctatttgcgtgtgctcgattat
aaatcgagtgaaaaggagctaaacatgagtgaagtgtactatggacttgctctgcaaatg
ctgacatatcttgatatcgtcgttacccactcccattcacttatcggcaaagaagcgatt
ccagccggtgttttgtattttcatgttcataatccggttgttaaatcaaagggtatgctc
agtttggataaaattgatgaagaaatctataagagctttaaaatgaatggacttgtattg
gatcatacaaatgttattcagatgatggatacatcgcttgatatagagacttccagtaaa
tctgacatcattccagctggatttaaaaaggatggatcgcttttagcagcttccaaagtt
gcgagtagggaagagttttcacttttgaatcatcacgtacgccgggtctatcaggaggct
ggtgatcgaatggtcgatggtgacgtagatatcacaccatataaattaaaggaaaaaacc
ccatgtaccttctgttcgtttaaatcagtgtgtcaattcgatcagtctttggaggagaat
caatttaggaatttagcacagaagaaacaaaatgatgttttggatttattaagaggggag
ggtgaaagatga
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