Peribacillus sp. R9-11: RE409_07040
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Entry
RE409_07040 CDS
T10247
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri03420
Nucleotide excision repair
peri03430
Mismatch repair
Brite
Enzymes [BR:
peri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RE409_07040
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RE409_07040
MMR (mismatch excision repair)
Other MMR factors
RE409_07040
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Ortholog
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GFIT
Other DBs
NCBI-ProteinID:
WMX56972
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Position
complement(1460168..1462441)
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AA seq
757 aa
AA seq
DB search
MNQAKSGNEIVHLHTVSAGELQTLFEKGKRDQLSCIICHKPLKLFIGIHETPYFYHSDPS
RSDCEVPNLEPINEDKPLEYMEQNGFKIPKSRTITETKTITEPYLKSRTITGNPPFTDKP
SILEQLEVPYFQELSARGVVLDSEQLKAVMTIDGPLLVLSGAGSGKTRVLTVRTAYMLTV
KKINPKSIMLVTFTAKSAKEMQQRLLSYPYMTPSLVSQIVSGTFHSIFYKILIFHEPTKW
QRDLLLKWDWEKEKILKQAGRELELDDKEFAYDQALQQIGLWKNSLVFPDDIKPNDEWEK
SCLFLYKNYEEYKEQTGKYDFDDMLVGCYTFFKNHPEFLKKYQQRFHYFLVDEFQDINKV
QYELIKLLSAESKNVCAVGDDDQAIYSFRGSDPKYILNFNYDFPGSQVVKLTENYRSSHE
IVATANRMIKRNQHRMEKKMRAQHNHGNPPVLFYPHDEELEATMIVSDIQEKIAKGANPG
DFAVLYRTHTMSRAIFERLAASNLPFVIEKDADSFYQRRVIRGMLAFMRLSLFPQDSKAA
SDVLSSLFLKQSILQELKAQTILQDCDFIDAFAFVKTGHAFQERKLKTIPTQIRAIKSMS
PLVALEIIEKDLGYQEYVKKRGNEANLEKGSDDIRDLKVAANRFPTVASFLDHVDHMTAM
VQEVKQLSKHFKDAIQLTTIHRSKGLEYQSVYVLAAVDGSIPHDFALESYRKGELAPLEE
ERRLLYVAATRAKKDLYLSVLQTRRGRTAHPSRFLKF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagcaaaatctggcaatgaaatcgtacatttacatactgtttcagctggtgag
ctgcagacactttttgaaaaaggaaaacgtgaccagctttcttgtatcatttgtcataaa
ccattaaaattatttatcgggatccatgagacaccctatttttatcatagtgacccttca
cggtcagactgtgaagtgccaaatttggaaccaataaatgaggataaaccattagaatat
atggaacagaatgggtttaagattcctaaatcacggaccattactgaaacgaaaacaatt
actgaaccttacctaaaaagccgaacgattacaggtaacccgccttttacagataaacct
tctatcctagaacaactagaagtcccttactttcaagaattatccgcacgaggagtagta
ctcgattcggagcaattaaaagcagtaatgacgattgatggaccacttcttgtcctatca
ggagccggcagcggaaaaactcgggtattaactgttcggactgcttatatgctaacggta
aaaaagatcaatccaaaaagtatcatgcttgtaacctttacggcgaaatccgccaaggaa
atgcaacagcgcctgctaagctacccttatatgactccttcccttgtttctcaaatcgtt
agtggtaccttccatagtatcttttataaaatactgattttccatgagccaaccaaatgg
caacgggatttactattaaagtgggattgggagaaagaaaaaatattgaaacaggctggt
cgagaattggaactcgatgataaggaatttgcatatgatcaagctcttcagcaaattggt
ctttggaaaaactcattggtttttccagacgatatcaaaccgaatgacgaatgggaaaaa
tcctgtctatttttatataagaattatgaagaatataaagagcaaacaggaaaatacgat
tttgatgatatgcttgtcggctgttatacattttttaaaaatcacccagaatttttaaaa
aagtatcagcaaaggtttcactattttttagttgatgagtttcaggatataaataaagtt
caatatgaactgataaaacttctttcggctgaatcaaaaaatgtttgcgccgtcggagat
gacgatcaagccatctattcattccgtgggagtgatccgaaatatattctaaatttcaat
tacgatttccccggttctcaagttgtaaaactaaccgaaaattaccggtcttcacatgaa
attgtcgctacagccaaccggatgattaagcgcaatcagcacagaatggaaaaaaagatg
cgtgcacagcataatcatggcaatcctcctgtgttattttatcctcatgatgaggaatta
gaggccacgatgattgtatccgatatccaggaaaaaatcgccaaaggagcaaaccctggt
gactttgcagttttgtacagaacacatacaatgtcgcgggccatttttgaaagactagca
gcttcaaatctgccctttgtaattgaaaaagatgcggattcgttttatcagcgccgagtg
attcgaggtatgcttgccttcatgcgtttgagtctatttcctcaggatagcaaggcagca
tcggatgtcctttcttcattatttttaaagcaaagtatactacaggaattaaaggcacag
acgatacttcaggattgtgattttattgatgcatttgcttttgttaaaacgggacatgct
tttcaggaacggaaattaaagacgattccgacacaaatccgtgctataaaaagtatgtca
ccgctcgtagctttagaaatcatcgagaaagatttagggtatcaagaatatgtaaaaaaa
cgcggaaatgaagccaatctcgaaaaaggttctgatgatatccgcgacctaaaagtggct
gcaaaccgttttccaaccgtcgcctccttcctagaccatgtcgaccatatgacagccatg
gtccaggaggttaaacagctgtcaaaacattttaaagatgccatacaactaacgaccata
caccgttccaaagggcttgaatatcaatctgtttacgttcttgctgctgtcgatggcagc
attccgcatgactttgcgcttgaatcataccggaaaggggaacttgcacctcttgaagag
gaaagacgcttgctctacgtagcagcaacccgggcgaagaaggatctttacctttccgtc
ctgcaaactagacgcggacgaaccgcccacccttcacgattcttaaagttttga
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