Peribacillus sp. R9-11: RE409_08735
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Entry
RE409_08735 CDS
T10247
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
peri Peribacillus sp. R9-11
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
peri03032
]
RE409_08735 (topA)
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_08735 (topA)
Enzymes [BR:
peri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RE409_08735 (topA)
DNA replication proteins [BR:
peri03032
]
Prokaryotic type
DNA Topoisomerases
RE409_08735 (topA)
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RE409_08735 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
SAND
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
WMX57285
LinkDB
All DBs
Position
1807582..1809657
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVENEYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDVDINSDCRVVFNEITKEAIKE
SFKSPRPINMKLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRMIIDREK
EIKDFVPEEYWTIRADFVKGNEQFEGSFFSLGGERKELNTEEDVKKVLASLSGGEFTIGT
VTKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELGKEGTVGLITYMR
TDSTRISDIAKQEAHSFIQNSYGDDYVQVEQRKEKKQTNAQDAHEAVRPTSTLREPSLVK
EFLSRDQFRLYKLIWERFVSSQMSSAVMDTMSIDLHNGDVIFRANGSKIKFPGFMKVYVE
GSDDSVEEKENALPDVKKGDQFFSKDVEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVTLDNKRFIPTELGEIVLELIREFFPDILDAEFTAKMEQEFDSVEEGS
VEWIKVIDEFYKDFAIHLAKAEVEMEKIEIKDEPAGEDCVECGHEMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCKEGNIIERKSKKRRLFYGCDTYPGCDFISWDKPLPRSC
PKCEGTLVEKKLKKGVQVQCMDCDFKETPQA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatatttagtgattgtggaatcgcccgcaaaggcgaaaacaattgaacgttac
ttaggaaaaaaatataaagtaaaggcttccatggggcatgtacgcgatttgcctaaaagc
caaatgggtgtcgatgttgaaaatgaatatgagcctaaatatataactatccgcggcaaa
ggaccggttctaaaagaattgaaaacagctgcaaaaaaagcaaaaaaaatctatctcgca
gctgaccccgacagagaaggtgaagcgattgcctggcatttagctcacagtctcgatgtc
gacattaattcagattgccgtgtggtattcaatgagattacgaaggaagcgatcaaagaa
tcatttaaatcaccaagacccattaatatgaagttggttgatgcacagcaggcaaggaga
atattggatcgtttggtcggatacaatatcagcccgcttttgtggaaaaaagtgaaaaaa
ggcttaagtgcaggacgagttcaatcggttgctgttcggatgattattgaccgagagaaa
gaaatcaaagactttgtaccggaagagtattggacaatcagggcagattttgttaaagga
aatgaacagtttgaaggttcctttttcagccttggtggtgaacggaaagaattaaacacg
gaagaagatgtcaagaaagtacttgcttctttaagcggcggcgaattcaccattggtacc
gtgacgaaaaaggaaagaaagcgtaatccagctgcaccttttacgacttcttccttgcaa
caagaagccgcgcggaaattaaatttccgtgccaagaaaaccatgatgcttgctcagcag
ctttatgaaggaattgagctcggaaaagaaggtacagtcgggctaatcacttatatgaga
acggattcgacccggatttcggatattgccaagcaggaagcccatagctttattcaaaac
agttatggtgatgattatgttcaggttgaacagcgcaaggagaaaaaacagacaaatgct
caggacgcgcatgaagcggttagaccgacaagcacattacgtgaaccaagtttagtgaag
gagtttttatctagagatcaattccgtttatataaattaatttgggaacgctttgtttca
agtcaaatgtcttcggctgtaatggatacaatgagcattgaccttcacaacggtgatgtc
attttccgggcaaatggttctaaaattaaatttccaggtttcatgaaggtatatgttgaa
ggttcggatgactcagtggaagaaaaggaaaatgcccttccagatgtaaaaaaaggagat
caattcttttcaaaagatgtcgaaccgaagcagcatttcacacagccaccgccacgctat
acagaggcgcgtcttgtcaaaacactagaggaactaggcataggccggccgtctacatat
gctcctacattggatacgattcaaaaacgtggctatgttacgcttgataataagcgattt
atcccgactgagcttggtgaaattgtccttgaattgatacgtgaattctttccggatatt
ctagatgcagaattcactgccaagatggaacaggaatttgatagtgtcgaagaaggaagc
gttgaatggattaaggtcattgatgagttttacaaagatttcgctattcatttggctaaa
gcggaagtcgaaatggagaaaattgaaatcaaggatgagcctgcaggggaagattgcgta
gaatgcggacatgaaatggtctttaaaatgggtcgatatggaaagtttatggcttgcagt
aatttcccggattgccgtaatacaaaaccaatcgttaaagaaatcggagtgaaatgtccg
aaatgtaaagaaggcaacatcattgagcgaaaaagtaaaaaacgccgactgttctacggt
tgtgatacttatccaggatgtgacttcatttcatgggacaaacctctacctcgtagttgt
ccaaaatgtgaaggtacgctagttgagaaaaaactcaaaaaaggcgtgcaggtacagtgt
atggattgtgatttcaaagaaacacctcaagcttag
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