Peribacillus sp. R9-11: RE409_09020
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Entry
RE409_09020 CDS
T10247
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
peri Peribacillus sp. R9-11
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
peri03016
]
RE409_09020 (truB)
Enzymes [BR:
peri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RE409_09020 (truB)
Transfer RNA biogenesis [BR:
peri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RE409_09020 (truB)
Prokaryotic type
RE409_09020 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TRAPPC10
Motif
Other DBs
NCBI-ProteinID:
WMX57338
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All DBs
Position
1864668..1865588
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AA seq
306 aa
AA seq
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MNGILPLWKPKGLTSHDCVFKLRKILKTKKVGHTGTLDPDVTGVLPICIGRATKVAEYLT
EAGKAYEGEVTLGFSTTTEDASGDKVAEKRITQVIQREQILEVLESLTGKIEQTPPMFSA
VKVNGKKLYEYARAGIEVERPTREVTIYEITLLDERSEFKGETISFRFRVKCSKGTYIRT
LAVMIGEKLGFPAHMSDLTRIESAGFKLEDCLTFAEVEAFMETGQTDEFLLPLERGLFHL
PKIQISDKVAKKVLNGAVLEQAKDVVVEKGQPFVMVDPSDKAIAIYQIHPTKEGLIKPVK
VLAQEL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtattctaccattatggaaaccaaagggattgacatcccatgattgtgttttt
aaattaaggaagatattaaaaacaaaaaaggttgggcatacaggcactttagatcctgat
gtcacaggggttttaccgatttgtatcggtagggcaacaaaagtcgccgaatatttgaca
gaggcaggtaaagcgtatgaaggggaagtgacccttggtttttcaacgacaacggaagat
gcaagcggcgataaggtagctgaaaaaaggattactcaagtgattcagcgtgaacaaatt
cttgaagttttagaatcattaacaggaaaaattgaacagactccgccgatgttttcagct
gttaaggtaaacgggaaaaagttatatgaatacgctcgggccggaatcgaagtggagcga
ccgacacgggaggttaccatttacgaaatcacccttctcgatgaacgttctgaattcaaa
ggagaaaccatttctttccgttttcgtgttaagtgcagtaaaggaacatatattagaacg
cttgctgtcatgataggtgaaaaattgggatttccagcacatatgtcagacctaacgcgg
attgaatcagctggttttaagcttgaagactgtctgacattcgctgaggtggaagcattc
atggaaaccggacaaacagatgagtttctgctgcccttagagcgaggattatttcatttg
cccaaaattcagattagtgataaagtagcaaagaaagtacttaacggtgcggtattggaa
caggctaaggatgttgttgttgagaaaggtcagccttttgtaatggttgatccatctgat
aaggctattgccatttatcaaatacatccgacaaaagagggattaattaaacctgtaaaa
gttttggcacaagaattatag
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