Peribacillus sp. R9-11: RE409_17935
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Entry
RE409_17935 CDS
T10247
Symbol
ndk
Name
(GenBank) nucleoside-diphosphate kinase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri00230
Purine metabolism
peri00240
Pyrimidine metabolism
peri01100
Metabolic pathways
peri01110
Biosynthesis of secondary metabolites
peri01232
Nucleotide metabolism
peri01240
Biosynthesis of cofactors
Module
peri_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
peri_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
peri_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
peri_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
peri_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RE409_17935 (ndk)
00240 Pyrimidine metabolism
RE409_17935 (ndk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peri04131
]
RE409_17935 (ndk)
Enzymes [BR:
peri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
RE409_17935 (ndk)
Membrane trafficking [BR:
peri04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
RE409_17935 (ndk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Peptidase_S77
Motif
Other DBs
NCBI-ProteinID:
WMX53956
LinkDB
All DBs
Position
complement(3703448..3703894)
Genome browser
AA seq
148 aa
AA seq
DB search
MERTFLMVKPDGVQRNLIGEIVSRFEKKGFLLAGAKLMVISQELAEQHYGEHKERPFFGE
LVDFITSGPVFAMVWEGENVIATARQMMGATNPKDAAAATIRGDFAVTVGKNIIHGSDSA
ESAVREIGLFFKEEELVEYSKLVNEWVY
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaacatttttaatggtaaagcctgacggcgttcaacgtaatttaatcggtgaa
atcgtttcccgctttgaaaagaaaggcttccttctagcaggagcaaaattaatggttatc
tctcaagaactagctgagcaacattatggtgagcacaaagaacgtcctttctttggcgaa
ttagtggacttcatcacttcaggtcctgtcttcgcaatggtttgggaaggtgaaaatgta
atcgcaactgcacgtcaaatgatgggcgctactaatcctaaagatgcagcagcagctaca
attcgtggagattttgcagtaactgtaggcaaaaacatcattcacggatcagattcagct
gaaagtgctgttcgtgaaatcggtttattcttcaaagaagaagaacttgttgaatattct
aaactagttaacgagtgggtttattaa
Peribacillus sp. R9-11: RE409_20765
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Entry
RE409_20765 CDS
T10247
Symbol
pyk
Name
(GenBank) pyruvate kinase
KO
K00873
pyruvate kinase [EC:
2.7.1.40
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri00010
Glycolysis / Gluconeogenesis
peri00620
Pyruvate metabolism
peri01100
Metabolic pathways
peri01110
Biosynthesis of secondary metabolites
peri01120
Microbial metabolism in diverse environments
peri01200
Carbon metabolism
peri01230
Biosynthesis of amino acids
Module
peri_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
peri_M00002
Glycolysis, core module involving three-carbon compounds
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RE409_20765 (pyk)
00620 Pyruvate metabolism
RE409_20765 (pyk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
peri04131
]
RE409_20765 (pyk)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peri04147
]
RE409_20765 (pyk)
Enzymes [BR:
peri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.40 pyruvate kinase
RE409_20765 (pyk)
Membrane trafficking [BR:
peri04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
RE409_20765 (pyk)
Exosome [BR:
peri04147
]
Exosomal proteins
Proteins found in most exosomes
RE409_20765 (pyk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK
PK_C
PEP-utilizers
DRTGG
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
WMX54475
LinkDB
All DBs
Position
complement(4266188..4267948)
Genome browser
AA seq
586 aa
AA seq
DB search
MRKTKIVCTIGPASESIEKLVQLIEAGMNVARLNFSHGNHEEHAARIRNIREAGEKAGKQ
VAILLDTKGPEIRTNNMENDAIELTAGDEVSISMNEVLGTPEKFSITYEGLLYDVHPGSR
ILLDDGLIGLEVLKVDEVKKEIHTKILNSGTLKNKKGVNVPGVSVNLPGITEKDEQDILF
GIEQGIDFVAASFVRRASDVLEVRELLQQNGAEHIQIIPKIENQEGVDRLDEILEVSDGL
MVARGDLGVEIPAEEVPLVQKQMIKKCNNAGKPVITATQMLDSMQRNPRPTRAEASDVAN
AIFDGTDAIMLSGETAAGTYPVEAVQTMHNIASRAETALDYREILSVRSKVNRHNVTDAI
GQSVAHTALNLNVGAIITPTESGHTARMISKYRPKAPIIAVTSNDHVSRRLALAWGVYPQ
IGPKATTTDEMLQTAIDESLHSGLVSHGDLVVITAGVPVGETGTTNLMKIHVLGEVLLKA
QGIGRKSAKGEVVIARNSKEALEKVTEGSVLVTIGSDRDMMPAIQKCAALITEEGGLTSH
AAVVGVTLGIPVIVGAEDATKIFKDKQRITVDASRGIIYDGHANVL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaaaccaagattgtttgtacaattggtcccgcaagtgaaagtatagaaaagctg
gttcaattaatagaagcaggaatgaatgtagctcggctgaatttttctcatggcaatcat
gaggagcatgccgctagaatccgcaatattagggaagcgggagagaaagcagggaaacag
gttgctatccttttagatacaaaaggtccggaaataaggacgaataatatggagaacgat
gctatagagttgactgctggtgatgaagtcagtatttctatgaatgaagtccttggaacg
cctgaaaaattttctattacgtatgagggacttctctatgatgtccatccgggatccaga
attttgttagatgatggtttaattggtcttgaagtgttaaaggtggatgaagtcaaaaaa
gaaatccatacgaaaattttaaacagtggaacacttaaaaataaaaaaggtgtaaatgtg
ccaggtgtttcagttaacctaccaggcatcacggaaaaagacgaacaggacatcctattt
ggaattgaacagggaattgactttgttgctgcctcttttgttcgtagggcatctgacgtc
ctagaagtgcgtgaacttctgcaacagaatggagcggaacatattcaaatcatccctaaa
attgaaaatcaagaaggcgtcgaccgtcttgatgaaatcctggaagtgtcagatggtttg
atggtagctcgtggagacctaggagtggaaattcctgcagaagaagtgccactagtccaa
aaacaaatgatcaaaaaatgtaacaatgccgggaaaccagttattacagctacgcaaatg
ctcgattcgatgcagcgtaacccacggccaacccgtgcagaagcaagtgacgtggccaat
gccatttttgatggaactgatgccatcatgctttccggtgaaacagcagctgggacgtac
cctgttgaggccgttcaaacgatgcataacattgcttctcgtgcagaaacagcccttgat
tatcgggaaatattatcagtaagaagcaaagtgaatcgtcataatgtcactgatgctatt
ggccagtctgttgcccatacggcgcttaatctaaatgtcggcgcaatcattacgcctacc
gagagcggtcatacggcacggatgatttctaaatatcgtcctaaggcaccgattatcgct
gttacatctaatgatcatgtttcaagaagacttgcattggcctggggagtttacccgcag
attggaccaaaagcgacgaccacggatgaaatgctccaaacggcaatcgatgaaagcctg
cattccggattagtatcccatggagacttagttgtcattacagctggtgtgcccgtaggt
gaaacaggaacgactaacttgatgaaaattcatgtattaggagaggttcttttgaaggct
caaggaatcggcaggaaatctgcgaaaggtgaagtggttatagctaggaattccaaggaa
gctttggaaaaagtaactgaaggatctgtattagttacaattggttctgatcgggatatg
atgccggcaattcaaaagtgtgctgcattgattactgaagaaggcggtttgacaagccac
gcagctgttgtgggagtcactttgggcattccggttatcgttggagcagaagatgcgacc
aaaatctttaaggataaacaaagaattacggtcgatgctagtcgcggaatcatttatgat
ggacatgctaacgttttatag
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