KEGG   Peribacillus sp. R9-11: RE409_19260
Entry
RE409_19260       CDS       T10247                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
peri  Peribacillus sp. R9-11
Pathway
peri03030  DNA replication
peri03430  Mismatch repair
peri03440  Homologous recombination
Brite
Enzymes [BR:peri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RE409_19260 (holA)
DNA replication proteins [BR:peri03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RE409_19260 (holA)
DNA repair and recombination proteins [BR:peri03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RE409_19260 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta_C DNA_pol3_delta AAA_assoc_2
Other DBs
NCBI-ProteinID: WMX54198
LinkDB
Position
complement(3963608..3964621)
AA seq 337 aa
MVLDVWKSIKKGQFAPVYLLYGTEAYLINETKQLLIEHVLHEDEMDFNFSQFDLEETPIE
TALEDVETLPFIGEKRLVFMQNPFFLTAEKTKSKVEHNVKRLEAYLADPVPYSIVVLTAP
YEKLDERKKITKELKRNAVLVEAKKLGDHELKAWVKERVAAYSVQIDEQATELLLELAGT
NLMMLTNELDKMALYVEADKRITIEVVEKLVAKSLEQNIFTLVDHVLQRKMESAMTIFHD
LLRQNEEPIKILSVMAGQIRLMYQVKELSRQGYSQQKIAGQLKVHPYRVKLALEKTGKFQ
ERELLSIMNDLAEADYKMKSGQADKAITLELLLLKIR
NT seq 1014 nt   +upstreamnt  +downstreamnt
ttggtattagacgtatggaaaagtattaaaaaagggcaattcgcgcctgtatatttgtta
tatggaacagaagcttatttaattaatgaaacaaagcagcttttgattgagcatgtcctt
cacgaagatgaaatggattttaacttttctcaatttgatttagaagagacgccgattgaa
acagcgcttgaggacgttgaaactcttccttttatcggggaaaaacgccttgtcttcatg
caaaatccattttttttgacagctgaaaaaacgaaatcgaaagttgaacataatgtaaaa
agactggaagcgtatttggctgacccagttccttattctattgttgttctgacagctcct
tatgaaaaactggacgaacggaaaaagattaccaaagaactgaagcgtaatgcggttctc
gttgaagcgaaaaagcttggcgatcatgaattaaaggcatgggttaaggagcgcgttgca
gcttattctgtccaaatagatgaacaagccacagaacttttgctcgaacttgcaggaacg
aatctgatgatgttgacaaatgaacttgataaaatggcactttatgtagaagctgacaaa
cgaattaccattgaggttgttgaaaagttagtcgctaaatctctagaacagaatatcttc
acacttgttgatcatgttttgcagcgaaaaatggaaagtgctatgacgatttttcacgat
cttcttcggcagaatgaagagccgattaaaatcttgagtgtaatggccggacagatccga
cttatgtatcaagtgaaggagctttcgcgtcaagggtatagtcagcaaaaaattgcaggg
caattgaaggtgcatccataccgagtaaagctagccctagaaaaaacggggaaattccag
gaacgcgagttgttgagtataatgaacgatttagctgaagcggattataagatgaaatcg
ggtcaagccgataaggcgatcacacttgagttgctgcttttgaaaattagataa

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