Peribacillus sp. R9-11: RE409_19485
Help
Entry
RE409_19485 CDS
T10247
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RE409_19485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_19485
Enzymes [BR:
peri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RE409_19485
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RE409_19485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
nSTAND3
AAA_16
NPHP3_N
Folliculin_C
T2SSE
AAA
AAA_12
NTPase_1
AAA_28
UvrD_C
TsaE
HHH_5
cobW
ABC_tran
AAA_29
AAA_17
AAA_18
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
WMX54242
LinkDB
All DBs
Position
complement(4002603..4005011)
Genome browser
AA seq
802 aa
AA seq
DB search
MSQQDSMDLFAEEKMFMKGSHLVTIFHNEENMYSVVRIRVNETNLNYDEKEAVVTGYFPR
MHEDETYIFYGAMKEHQRFGLQFHVEHFRKDLPQSKEGIVSYLSGELFKGIGKKTAESIV
ETLGEKAISKILAQPSILDDIPKLSGEKAKSLYDTLVEHQGLEQVMIALNQYGFGPQLSM
KIYQMYKHDTITMVQGNPYKLVEDIEGIGFGRADELGHQLGISGNHPDRIKAACLYTLES
QCLQDGNIYIEAEQLLEAVKRLLEENKRDRIEFTNISSEIIELTEAGKIVVEDQRIYLPS
LYYSEKGIVMNIKRMLAQTEYEDQFPESEFLLALGKLEERLNVSYASAQKEAIQTALQSP
MLILTGGPGTGKTTVIKGIVELYAELHGVSMDINDYKKEGSDPFPFVLAAPTGRAAKRMA
ESTGLPAVTIHRLLGWNGSEGFSHDEDNQLEGRIVIIDEVSMVDTWLAHQLFKALPENCQ
VILVGDEDQLPSVGPGQVLKDLLASNCVPTVSLEHIYRQADGSSIIELAHDIKKGRLPND
VTKQQEDRSFIRCKTDQIAQVIEKVVANARTKGFTAKDIQVLAPMYRGPAGIDALNKMLQ
EVFNSNVNEKRREIKFGDVIYRTGDKVLQLVNQPEEGVFNGDMGEIVSILFAKENTDHVD
KIIISFEGIEVTYTKQDLNQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTA
ITRSKNFLILCGEEDAFRLGIERNDEMRRKTTLLEKLRETLNDEEMPAESAELPMQEESY
FDILMHEDPMIGMGNVTPYDFM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagcaagattcgatggatttgtttgcagaagagaaaatgtttatgaaaggaagt
catttagtgacgatctttcataatgaagaaaatatgtactcggttgtaagaatccgtgtg
aatgaaacgaatttgaactatgacgagaaggaagcggtcgtcacgggttattttccgagg
atgcatgaggatgagacgtatattttttatggagcaatgaaagagcaccaacgttttggt
cttcaatttcatgtcgagcattttcgaaaggatttgccccaatccaaggaaggaatcgtc
agttatttatctggtgaactgttcaaaggtattgggaaaaaaacagccgaaagcattgtc
gaaacactcggggagaaggcaatttctaaaattctggctcagccttccatacttgatgat
attccgaagctatccggggaaaaggcgaagagtctctatgatactttagtcgaacatcaa
ggtctggaacaggtaatgattgctcttaatcaatatggctttggtccacagctgtctatg
aagatttatcaaatgtataagcatgatacaatcaccatggttcagggaaatccatataag
cttgtggaggatatcgaaggaattggttttgggcgagcggatgagcttgggcatcagctc
ggcatttccggtaaccatcctgatcgtatcaaggctgcgtgcttatatacactagaatca
caatgtctgcaggatggaaatatctacatagaagctgagcagctgttggaagctgtcaag
cggctgcttgaggagaataagcgcgatcgaattgagttcacaaacatttcctcggaaata
atcgaattaacggaggcggggaaaatcgttgtcgaagatcaacgaatttacctgccatcc
ctttactattctgaaaagggaattgttatgaacatcaagcggatgctagcacaaaccgag
tatgaagaccagttcccagaatcggaatttttactggcacttggtaagctggaagagcgt
ctaaatgtttcctatgcctcagctcaaaaagaggcgatacaaacagccctgcagtcgcct
atgttgattttgacgggtggacctggtacggggaagacaacggttatcaaagggattgtc
gagttatatgccgaacttcatggtgtatctatggacattaacgattataaaaaagagggc
agcgatccgttcccgtttgtgcttgcggcacctactggacgtgcagcgaaacgcatggct
gaatcgacgggtcttcccgctgttacgattcaccgcttgctcggatggaacggaagtgaa
ggcttttcccatgatgaagataatcagttagaaggccgcattgtcattattgatgaggtt
tctatggtggatacgtggttagctcatcaattgtttaaagccttgccggaaaattgccaa
gtgattttagttggtgatgaagatcagctgccttcagtcggaccgggacaggtgctaaag
gatttgcttgcttcgaattgtgtgccgactgtcagtcttgagcatatttatcgtcaagcg
gatggttcatcaatcattgaattggcccatgatataaaaaaaggccggcttccaaatgat
gttacgaagcagcaggaagatcgatcgttcattcgctgtaagactgaccaaatcgctcag
gttattgagaaagttgttgcgaatgccaggacgaagggtttcactgccaaagatattcaa
gtgctggccccgatgtatagaggacctgccgggattgatgcgttgaataaaatgctgcaa
gaagtgtttaatagcaatgtgaatgaaaagcggcgggaaatcaagtttggagacgtgatc
taccgaacgggagacaaagtgcttcaactggtgaaccagccggaagaaggcgtctttaac
ggtgatatgggtgaaatcgtgtcaattttgtttgcgaaggaaaatactgatcatgtcgat
aagatcattatatcgtttgaaggcattgaagtaacttacacgaagcaggatttgaaccag
attacccacgcgtattgctgttcaatccataaatcgcagggaagcgagtttcccattgtg
attttgcctgttgtaaaaagttattatcggatgctccgacgtaatctattgtatacagcg
attacccgaagcaagaatttcttgatactttgtggtgaagaagatgctttccgtttaggt
atcgagcgcaatgatgaaatgcgccggaaaactacattacttgaaaaacttcgtgaaact
ttgaatgatgaagaaatgccagctgaatctgcagagttgccaatgcaagaggaaagttat
tttgacatactgatgcatgaagatccgatgattgggatgggtaatgtcacaccttatgat
tttatgtag
DBGET
integrated database retrieval system
