Peribacillus sp. R9-11: RE409_20145
Help
Entry
RE409_20145 CDS
T10247
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
peri Peribacillus sp. R9-11
Pathway
peri00860
Porphyrin metabolism
peri01100
Metabolic pathways
peri01110
Biosynthesis of secondary metabolites
peri01120
Microbial metabolism in diverse environments
peri01240
Biosynthesis of cofactors
Module
peri_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
peri_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RE409_20145 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
peri04147
]
RE409_20145 (hemB)
Enzymes [BR:
peri01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RE409_20145 (hemB)
Exosome [BR:
peri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RE409_20145 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
DUF1462
Motif
Other DBs
NCBI-ProteinID:
WMX54363
LinkDB
All DBs
Position
complement(4143281..4144276)
Genome browser
AA seq
331 aa
AA seq
DB search
MKDIPFNRHRRLRASAGMRALVRETQLHKEDLIYPIFVIDGENVKNEISSMPGIYQLSMD
NLGAEMDEVVSLGIKSVILFGVPFDHDKDEHGTGAFHHNGLVQEATRLIKKQYPEIIVIA
DTCLCEYTSHGHCGVVEGDKILNDASLNLLAKTAISQAEAGADIIAPSNMMDGFVAAIRA
GLDEAGYEDIPIMSYAVKYASAFYGPFREAANGAPQFGDRKTYQMDPANRLEAFREAESD
VAEGADFLIVKPALSYMDIIRDVKNNFNLPVVSYNVSGEYSMVKAAANNGWIDEKAIVME
MLTGLKRAGSDLIITYFSKEVARWIDEDNKR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattccattcaatcgccaccgtcgcctgcgtgcaagtgctggcatgcgagct
ctagtccgtgaaacacaattgcataaagaggatttaatctatccgattttcgtcattgac
ggagaaaacgtaaaaaatgaaattagctcgatgcccggtatttatcagctttctatggat
aatctgggagcagaaatggatgaagtcgtgagtctaggcattaaatcagtcattttattt
ggtgtcccttttgatcatgataaagacgaacatggcacaggtgcttttcatcataacggt
cttgtacaagaggcgacccgtcttatcaaaaaacaatacccggaaatcattgtcattgct
gatacatgtctttgtgagtatacaagccatggccattgtggagtcgttgagggagacaag
attttaaacgatgcttctcttaaccttcttgcaaaaacagctattagccaggccgaagcg
ggcgctgatatcattgcaccttctaacatgatggacggatttgttgcggccattcgtgca
ggtttggatgaagcgggttatgaagatatcccaatcatgtcctatgctgtaaaatacgct
tcagccttttacggcccattccgtgaagctgcgaatggcgcgccacaatttggtgacagg
aagacgtaccaaatggatcctgcgaatcgtcttgaagcgttccgtgaagcggaatcagat
gttgctgaaggtgcggatttcttaatcgtgaaaccagccctttcttatatggacatcatc
agagatgtaaaaaataactttaatcttcctgttgtttcatacaatgtgagcggagaatat
tccatggtaaaagctgcggccaataatggctggattgatgaaaaagcaattgtaatggaa
atgctgacaggcttaaaacgtgcaggatcggacctaatcattacgtatttttcaaaagag
gtagcacgctggattgatgaagataataaaagataa
DBGET
integrated database retrieval system
