Peribacillus sp. R9-11: RE409_26740
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Entry
RE409_26740 CDS
T10247
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
peri Peribacillus sp. R9-11
Pathway
peri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RE409_26740 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peri03021
]
RE409_26740 (rho)
03019 Messenger RNA biogenesis [BR:
peri03019
]
RE409_26740 (rho)
Transcription machinery [BR:
peri03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RE409_26740 (rho)
Messenger RNA biogenesis [BR:
peri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RE409_26740 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA
ATPase_2
NACHT
AAA_22
AAA_25
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WMX55568
LinkDB
All DBs
Position
complement(5502952..5504241)
Genome browser
AA seq
429 aa
AA seq
DB search
MNLTISNLENMKLKDLYEHAREYKVSYYSKLSKKELIFAILKAQAEQDGLLFMEGVLEII
PSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEAV
NGDNPESAKERVHFPGLTPLYPNRQIKLETTPKNLSTRIMDVLAPVGFGQRGLIVAPPKA
GKTMLIKEIANAITTNHPESELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRALAERRIFPAIDIRR
SGTRKEELLIPKDRLDKLWAIRKTMSDSPDFAEKFLRRLKQTKGNEEFFSKLDEEMLEMK
KGPANAKRS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaactatttccaatttagaaaacatgaaactaaaggacctctatgagcacgcg
cgtgaatataaagtttcctattacagcaaactgtcaaaaaaggaacttattttcgcaatc
ttaaaggcacaagctgagcaagatggtcttctgttcatggaaggcgttttagagattatc
ccttcagagggctttggtttcttacgtccaattaactattctccaagctcggaggatatc
tatatttctgcttcgcagatccgcagatttgatttgcgtaacggtgataaggtttccggt
aaggttaggccgccaaaagaaaacgagcgttattatggattgctgcatgttgaagctgtc
aatggagataacccagagtccgctaaagagcgtgttcatttcccaggcttaacaccgctg
tatccaaacagacaaattaaactggaaacaacaccgaagaatttatcaacgagaattatg
gatgtcttagcacctgttggttttggacagcgtggtttgattgttgcaccgccaaaggct
ggtaaaacgatgttaatcaaagaaattgctaatgccataaccacgaatcatccggaatcg
gaattgattgtattgcttattgatgaacgtccggaagaagtaacagacattgaacgttcc
gtggctggggacgtggttagttcgacgttcgatgaagtgccggagaaccatatcaaagtg
gcagaactagtgttagaacgggcaatgcgcctagttgaacataaacgtgatgttattatt
ttaatggacagtattactcgtctggcacgtgcatacaaccttgtcattccgccaagcggt
cgtacactatccggagggattgacccggctgcatttcaccggccaaaacgttttttcggt
gcagctagaaatatcgaagagggtggtagcttgacgattcttgctacagctttggtagat
acaggttcccgaatggacgacgtcatttatgaagagtttaaaggtacaggtaatatggag
cttcatttagatcgggcccttgcagaaagacgtattttcccagcgattgatattcgtcgc
tctggtactcgtaaagaagaactgttaattccgaaagatcgtttggataaactttgggca
attcggaaaacaatgtctgattcacctgattttgccgaaaaattccttcgccgtttaaaa
cagacaaaaggaaatgaagaatttttcagtaagttggatgaagagatgttagaaatgaaa
aagggaccagcaaacgcaaaacgttcgtaa
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