Peribacillus sp. R9-11: RE409_26780
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Entry
RE409_26780 CDS
T10247
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
peri Peribacillus sp. R9-11
Pathway
peri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
peri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RE409_26780 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
peri03021
]
RE409_26780 (rpoE)
03400 DNA repair and recombination proteins [BR:
peri03400
]
RE409_26780 (rpoE)
Transcription machinery [BR:
peri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RE409_26780 (rpoE)
DNA repair and recombination proteins [BR:
peri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RE409_26780 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
WHD_RNase_II
BUD22
Motif
Other DBs
NCBI-ProteinID:
WMX55576
LinkDB
All DBs
Position
complement(5512401..5512982)
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AA seq
193 aa
AA seq
DB search
MSLKQYSKEQLLEMSLIEMAYDLLVERNEPIPFKDLISELATLHHLSKAEVAKRIAQFYT
DLNVDGRFTSLGDNRWGLKTWYPVDQIEEEVVHVVKPKKKKKAKKAAVVVDDFDELEDED
LDFEEDIDDLDEDEDDDDDDLLGAPVIDEELLEDDVDDDDDLEEEIIEDEAFVIEDDEDE
DEDEEELDEDHEK
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaaaacaatactcaaaagagcagttattggaaatgtccttaatagagatggca
tatgatttgttagtggaaagaaatgaaccgattccatttaaagatttaataagtgagtta
gctacgcttcatcatttatctaaagcagaagtggcaaaaagaattgctcaattctataca
gatttgaatgtagatggccgatttacttcacttggagacaaccgctggggattgaaaaca
tggtacccagttgaccaaattgaagaagaagttgtacatgttgtaaaaccgaagaagaaa
aagaaagctaaaaaagccgctgtggttgtcgacgatttcgatgagcttgaagatgaagat
cttgattttgaagaagatatcgatgatttagacgaagatgaggatgacgacgacgatgat
cttttaggtgctccagtaatcgacgaggaacttttagaagatgacgtagacgatgatgac
gatctagaagaagaaataattgaagacgaagcatttgtcatagaagacgatgaggacgaa
gatgaagacgaagaagagcttgatgaagatcatgagaaataa
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