Peribacillus sp. JNUCC41: JNUCC41_00295
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Entry
JNUCC41_00295 CDS
T11068
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JNUCC41_00295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_00295
Enzymes [BR:
perj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JNUCC41_00295
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNUCC41_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
nSTAND3
T2SSE
NPHP3_N
AAA_16
AAA
AAA_28
UvrD_C
Folliculin_C
TsaE
AAA_12
AAA_17
AAA_18
HHH_5
DEAD
NTPase_1
ABC_tran
AAA_29
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QOS90262
LinkDB
All DBs
Position
complement(45782..48187)
Genome browser
AA seq
801 aa
AA seq
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MSQQDSLDLFSEEKMFMKGSHLVTIFHNEENMYSVVRIRVHETNLNYEEKEAVVTGYFPR
MHEDEIYIFYGAMKEHPRFGLQYHVEHFRKDLPQSKEGIVSYLSGDLFKGIGKKTAESIV
DSLGEKAISKILVQPSLLDDIPKLSGEKAKGLYDTLVEHQGLEQVMIALNQYGFGPQLSM
KIYQMYKQDTITMVQGNPYKLVEDIEGIGFGRADELGHQLGISGSHPDRIKAACLYTLES
QCLQDGNIYIEAEQLLEAVKRLLEENKRDRIEFTNISSEIIELTQEGKIVVEDQRIYPPS
LFYSEKGIVMNIKRLLAQTEYEDQFPESEFLLALGELEERLDVSYAPAQKEAIQTALQSP
MLILTGGPGTGKTTVIKGIVELYAELHGVSMDINDYKKEGSDPFPFVLAAPTGRAAKRMA
ESTGLPAVTIHRLLGWNGSEGFSHDEDNQLDGRIVIIDEVSMVDTWLAHQLFKALPENVQ
VILVGDEDQLPSVGPGQVLKDLLASNCVPTVSLEHIYRQADGSSIIELAHEIKKGRLPDD
VTKQQEDRSFIRCQTGQIPQVIEKVVANARTKGFTAKDIQVLAPMYRGPAGIDALNKMLQ
EVFNSNANEKRREIKFGDVIYRTGDKVLQLVNQPEEGVFNGDMGEIVSILFAKENTDHVD
KVIISFEGIEVTYTKQDLNQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTA
ITRSKNFLILCGEEDAFRLGIERNDEMRRKTTLREKLKEILSEEEMPQEKEEVHQQSSYL
DILMHADPMIGMENVTPYDFM
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
ttgagccagcaagattcgttggatttgttttcagaagagaaaatgttcatgaaaggaagt
catttagtgacgatctttcataatgaagaaaacatgtactcggttgtaagaattcgcgtg
catgaaacgaatctgaattatgaagagaaggaagcggtcgtaacaggttattttccaagg
atgcatgaggatgagatctatattttttatggggcgatgaaggaacatccgcgttttggc
cttcaataccatgtagagcattttcgtaaggatctgcctcaatccaaggaaggaatcgtc
agttatttatccggtgaccttttcaaggggatcgggaaaaaaacagctgaaagcattgtt
gattcactgggtgaaaaggcaatttcaaaaattctggttcagccttcgctacttgatgac
atcccgaagctatccggggaaaaggcaaagggtctctatgatacattggtcgagcatcaa
gggctggagcaggtgatgattgccctgaatcaatatggcttcggtccgcagctgtcgatg
aagatatatcaaatgtataagcaggatacaatcacgatggttcagggaaatccgtataag
cttgttgaggatattgaagggattggctttggaagggcggatgagcttgggcatcagctg
ggcatttccggcagccatcccgatcgaatcaaggctgcgtgtttgtatacgcttgaatca
caatgccttcaggacggaaatatctacatagaagccgagcagctattggaggctgtcaaa
cgtcttctggaggaaaataaacgggaccgtattgagtttacgaacatttcctcggaaata
atcgaattgacgcaagagggaaaaatagttgtcgaggatcaacgaatttatccgccttcg
ctattctattcggaaaagggaatcgtgatgaacatcaagaggctgcttgctcaaaccgag
tatgaggaccagttcccggaatcggagttcttgctggcacttggagagctggaagaacgg
ctggatgtatcttatgcaccggcccaaaaggaagcgatccaaacagccctgcaatcaccc
atgttaatcttgacgggcggacctggtaccggtaagacgacagtcatcaaaggcatcgtt
gaactatatgcagagctgcatggtgtatccatggacattaatgattataaaaaagaagga
agcgatccatttccattcgtacttgcggcccctactggccgtgcagcgaaacgaatggcc
gaatcgactgggctcccggctgttacgattcaccgtttgctggggtggaacgggagcgaa
ggcttttcccatgatgaggataatcagctggatggccgtatcgtgatcatcgatgaggtt
tccatggtggatacgtggctggcccatcaattgtttaaagctctgccggaaaatgtccaa
gtgatattggttggtgatgaagatcagctgccatctgttggacctgggcaggttttaaag
gatttgcttgcatcgaattgtgtaccgactgtcagtctggaacatatttatcgtcaagct
gatggctcatcgatcattgaattggcccatgaaatcaaaaaaggaaggcttccggatgat
gtcacgaaacagcaagaagatcgatcgttcattcgctgccaaactggtcaaatcccccaa
gtaatcgagaaggtggttgccaatgcgaggacgaaaggcttcacggccaaggatatacag
gtgctggctcccatgtatagagggcctgccgggattgatgccctgaataaaatgcttcag
gaagtgttcaatagcaatgcgaatgagaagcggcgggaaataaaattcggagatgtaata
tacagaacgggagataaggtgcttcaactggtgaaccaaccggaggagggggtctttaat
ggcgatatgggtgaaatcgtgtccatcttgttcgctaaagaaaataccgatcatgtcgat
aaagtaatcatatcattcgaaggcatcgaagtgacttatacgaaacaggacttgaaccag
attacacatgcctattgctgctccatccataagtcgcagggaagtgaattccccattgtc
attttacctgtagtgaaaagttattatcggatgctccgccgtaatttattgtatacggcg
attacccgcagtaaaaatttcttgatcctttgtggcgaagaagatgcattccgtttaggg
atcgagcggaatgatgagatgcgccggaaaacgactttgcgtgaaaagctgaaagagatt
ttgagtgaagaagaaatgccgcaggaaaaggaagaggtacatcaacaatcaagttatctt
gatattctcatgcatgctgatccgatgatcggtatggagaatgtcacgccatatgatttt
atgtag
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