Peribacillus sp. JNUCC41: JNUCC41_01335
Help
Entry
JNUCC41_01335 CDS
T11068
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj03030
DNA replication
perj03410
Base excision repair
perj03420
Nucleotide excision repair
perj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JNUCC41_01335 (polA)
03410 Base excision repair
JNUCC41_01335 (polA)
03420 Nucleotide excision repair
JNUCC41_01335 (polA)
03440 Homologous recombination
JNUCC41_01335 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
perj03032
]
JNUCC41_01335 (polA)
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_01335 (polA)
Enzymes [BR:
perj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JNUCC41_01335 (polA)
DNA replication proteins [BR:
perj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JNUCC41_01335 (polA)
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JNUCC41_01335 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC41_01335 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QOS90456
LinkDB
All DBs
Position
complement(270599..273223)
Genome browser
AA seq
874 aa
AA seq
DB search
MDKKLVLIDGNSIAYRAFFALPLLNNDKGVHTNSVYGFTMMLNRILEEEKPTHILVAFDA
GKTTFRHASFKEYKGGRQKTPPELSEQFPFIRELLDCFQIKRYELENYEADDIIGTLSLQ
AEKDGFEVKVISGDKDLTQLSSPSTTVSITKKGITEIEEYTPKHIHEKYGLSPLQIIDLK
GLMGDASDNIPGIPGVGEKTALKLLHQFETVENLLQSIDEVSGQKLKEKIEEHRDLALLS
KELATITREAPLEVSVNETEYTGMDQDRVISFYKELGFSTLLDKLDVTESAPLEQEKIEV
HTSEMTEAMFADESALYVEILEDNYHHADIRGIAISNEQGNFYFNGDDALSSGAFKSWAE
DETKKKTVFDAKRTVVALRHRGVEIKGIDFDVFLASYILNPAESVDEVAEITKTQGTTRL
ETDDVFYGKGAKRKIPEEAELREHIARKSKAILSLKEPMIDKLQEFEQFHLFTELELPLS
IILANMEWQGIKVDIGRLKNMGQELAIRLRNIEARIFDLAGEAFNINSPKQLGAILFEKL
ELPVMKKTKTGYSTSADVLEKLENKHDIVKEILLYRQLGKLQSTYIEGLLKVVNGKTDKV
HTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWIIFAADYSQIELRVL
AHIANDSGLVEAFQAGMDIHTRTAMDVFHVPAEQVTANMRRHAKAVNFGIVYGISDYGLS
QSLGITRKEAGEFIEKYLRSFPGVQEYMEESIHEARQKGYSTTLMQRRRYIPEITSRNFN
IRSFAERTAMNTPIQGSAADIIKLAMINMNKRLKREGLKTRMLLQVHDELIFETPPEELE
ILKVIVPEEMENAIEMNVPLKVDYAFGPTWFDAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttggataaaaagttagtacttatagatggaaacagcattgcgtaccgtgcgttttttgcg
cttccgctcttgaataatgataagggggtccatacgaattccgtgtacggattcaccatg
atgctcaatcgcattcttgaagaagaaaagcctacgcacatacttgtggcattcgatgcg
ggtaaaacgacattcagacatgcatcatttaaagaatataagggcgggcgtcaaaaaacg
cccccagaactgtcggagcaattccctttcattcgcgaactgcttgattgttttcaaata
aaaaggtatgaactggagaactacgaagccgatgatattatcggtacgctgtccttacaa
gcggaaaaagatggttttgaagtgaaggtcatttcaggtgataaggatttaacgcaatta
tcctcccctagtacgacggtttccatcacgaaaaaggggattactgaaattgaggaatac
actccaaagcatatacatgaaaaatacggcctgtcccctttgcaaatcattgatttaaaa
gggttgatgggagatgcttccgacaatattcccggtattccgggtgtaggtgaaaagact
gcccttaaattattgcatcaattcgaaacggttgaaaaccttctgcagtcgattgatgag
gtaagtggacaaaaattgaaagagaaaatagaagaacatagagacctggccctattgagc
aaagagctggctacgataacgagggaagcgccgcttgaagtttccgtaaacgagaccgag
tacactggcatggatcaggatcgagtcatctcattctataaggagcttgggttttcgact
ttgctcgataaattggatgtaacggaaagtgcaccgcttgaacaggagaagatagaagtg
cacacgtccgaaatgacagaagcaatgtttgcggatgaaagtgccctatatgttgagatt
ttagaagataattatcatcatgccgatataaggggaatcgccatcagtaatgaacaaggt
aatttttacttcaatggggatgatgctctgagttccggggcatttaaatcctgggcagag
gatgaaacaaaaaagaaaacggttttcgatgcgaagcgtacggttgtggcactgcgtcat
cggggagtcgaaataaaaggcatcgattttgatgtatttttggcatcctatatcctgaat
cccgcagagtcagtggacgaagtggcagaaattacgaaaactcaaggtacgacccgcctt
gaaacagatgatgttttttatggaaaaggtgcaaaacgcaaaatacctgaggaagcggaa
ttgagggagcatatcgccagaaaatcgaaggcgatcctctctctgaaagaaccgatgatc
gataagctgcaagaattcgagcaatttcacctatttacggaactggagctgccactgtcg
atcattctggccaatatggaatggcagggaatcaaggtggatataggccgattgaaaaac
atgggacaggagttagccattcgcttaagaaacatcgaagcccgaatttttgatttggct
ggagaggcgttcaatatcaattcacctaaacagctcggagccatcctgtttgaaaagctg
gagcttccagtcatgaagaaaaccaaaacgggatattcgacttcagccgatgtgctggaa
aaactggagaacaagcatgatatcgttaaggagatattgctgtatcgccagcttggcaag
ttgcaatcaacttatattgaagggctgcttaaagtggtcaatggcaaaacggacaaggtg
cacacccggttcaaccaagcgttgacccagaccggccgtttaagttctacagatcccaat
ctgcagaatatcccgatcaggttggaagaaggcaggaaaatcaggcaagccttcattcct
tccgaaaaggattggatcatttttgctgccgattactcacagatcgagttacgcgtcctg
gcgcatatcgccaatgacagcggattggtggaagcattccaggccgggatggacatccat
acaaggacagccatggatgtattccacgtaccggcagagcaagtcacggcgaacatgagg
cgccatgccaaagcggtcaatttcggaatcgtttatggtataagtgactacgggctatcg
caaagtctcggcatcacgagaaaagaagcgggagagttcatcgagaagtatttaagaagc
tttcctggtgttcaggaatatatggaagaaagcatacatgaggcccgtcaaaaaggatat
agcacgactctgatgcaaagaaggcgctatatacctgagataacaagcaggaatttcaac
atcaggagctttgccgaacggacagcgatgaacacgccgattcaaggcagtgccgcagat
atcatcaagctagccatgataaacatgaataagcgcctgaaacgggaaggtcttaaaacg
agaatgcttcttcaggtgcatgatgaattgatttttgaaacgcctcccgaggaactcgaa
atccttaaagtgatcgttccggaggaaatggaaaatgccattgaaatgaacgtgcctctt
aaagtggattatgcttttgggccaacatggtttgatgccaaataa
DBGET
integrated database retrieval system