KEGG   Peribacillus sp. JNUCC41: JNUCC41_01335
Entry
JNUCC41_01335     CDS       T11068                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
perj  Peribacillus sp. JNUCC41
Pathway
perj03030  DNA replication
perj03410  Base excision repair
perj03420  Nucleotide excision repair
perj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:perj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JNUCC41_01335 (polA)
   03410 Base excision repair
    JNUCC41_01335 (polA)
   03420 Nucleotide excision repair
    JNUCC41_01335 (polA)
   03440 Homologous recombination
    JNUCC41_01335 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:perj03032]
    JNUCC41_01335 (polA)
   03400 DNA repair and recombination proteins [BR:perj03400]
    JNUCC41_01335 (polA)
Enzymes [BR:perj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JNUCC41_01335 (polA)
DNA replication proteins [BR:perj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     JNUCC41_01335 (polA)
DNA repair and recombination proteins [BR:perj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     JNUCC41_01335 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     JNUCC41_01335 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: QOS90456
LinkDB
Position
complement(270599..273223)
AA seq 874 aa
MDKKLVLIDGNSIAYRAFFALPLLNNDKGVHTNSVYGFTMMLNRILEEEKPTHILVAFDA
GKTTFRHASFKEYKGGRQKTPPELSEQFPFIRELLDCFQIKRYELENYEADDIIGTLSLQ
AEKDGFEVKVISGDKDLTQLSSPSTTVSITKKGITEIEEYTPKHIHEKYGLSPLQIIDLK
GLMGDASDNIPGIPGVGEKTALKLLHQFETVENLLQSIDEVSGQKLKEKIEEHRDLALLS
KELATITREAPLEVSVNETEYTGMDQDRVISFYKELGFSTLLDKLDVTESAPLEQEKIEV
HTSEMTEAMFADESALYVEILEDNYHHADIRGIAISNEQGNFYFNGDDALSSGAFKSWAE
DETKKKTVFDAKRTVVALRHRGVEIKGIDFDVFLASYILNPAESVDEVAEITKTQGTTRL
ETDDVFYGKGAKRKIPEEAELREHIARKSKAILSLKEPMIDKLQEFEQFHLFTELELPLS
IILANMEWQGIKVDIGRLKNMGQELAIRLRNIEARIFDLAGEAFNINSPKQLGAILFEKL
ELPVMKKTKTGYSTSADVLEKLENKHDIVKEILLYRQLGKLQSTYIEGLLKVVNGKTDKV
HTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWIIFAADYSQIELRVL
AHIANDSGLVEAFQAGMDIHTRTAMDVFHVPAEQVTANMRRHAKAVNFGIVYGISDYGLS
QSLGITRKEAGEFIEKYLRSFPGVQEYMEESIHEARQKGYSTTLMQRRRYIPEITSRNFN
IRSFAERTAMNTPIQGSAADIIKLAMINMNKRLKREGLKTRMLLQVHDELIFETPPEELE
ILKVIVPEEMENAIEMNVPLKVDYAFGPTWFDAK
NT seq 2625 nt   +upstreamnt  +downstreamnt
ttggataaaaagttagtacttatagatggaaacagcattgcgtaccgtgcgttttttgcg
cttccgctcttgaataatgataagggggtccatacgaattccgtgtacggattcaccatg
atgctcaatcgcattcttgaagaagaaaagcctacgcacatacttgtggcattcgatgcg
ggtaaaacgacattcagacatgcatcatttaaagaatataagggcgggcgtcaaaaaacg
cccccagaactgtcggagcaattccctttcattcgcgaactgcttgattgttttcaaata
aaaaggtatgaactggagaactacgaagccgatgatattatcggtacgctgtccttacaa
gcggaaaaagatggttttgaagtgaaggtcatttcaggtgataaggatttaacgcaatta
tcctcccctagtacgacggtttccatcacgaaaaaggggattactgaaattgaggaatac
actccaaagcatatacatgaaaaatacggcctgtcccctttgcaaatcattgatttaaaa
gggttgatgggagatgcttccgacaatattcccggtattccgggtgtaggtgaaaagact
gcccttaaattattgcatcaattcgaaacggttgaaaaccttctgcagtcgattgatgag
gtaagtggacaaaaattgaaagagaaaatagaagaacatagagacctggccctattgagc
aaagagctggctacgataacgagggaagcgccgcttgaagtttccgtaaacgagaccgag
tacactggcatggatcaggatcgagtcatctcattctataaggagcttgggttttcgact
ttgctcgataaattggatgtaacggaaagtgcaccgcttgaacaggagaagatagaagtg
cacacgtccgaaatgacagaagcaatgtttgcggatgaaagtgccctatatgttgagatt
ttagaagataattatcatcatgccgatataaggggaatcgccatcagtaatgaacaaggt
aatttttacttcaatggggatgatgctctgagttccggggcatttaaatcctgggcagag
gatgaaacaaaaaagaaaacggttttcgatgcgaagcgtacggttgtggcactgcgtcat
cggggagtcgaaataaaaggcatcgattttgatgtatttttggcatcctatatcctgaat
cccgcagagtcagtggacgaagtggcagaaattacgaaaactcaaggtacgacccgcctt
gaaacagatgatgttttttatggaaaaggtgcaaaacgcaaaatacctgaggaagcggaa
ttgagggagcatatcgccagaaaatcgaaggcgatcctctctctgaaagaaccgatgatc
gataagctgcaagaattcgagcaatttcacctatttacggaactggagctgccactgtcg
atcattctggccaatatggaatggcagggaatcaaggtggatataggccgattgaaaaac
atgggacaggagttagccattcgcttaagaaacatcgaagcccgaatttttgatttggct
ggagaggcgttcaatatcaattcacctaaacagctcggagccatcctgtttgaaaagctg
gagcttccagtcatgaagaaaaccaaaacgggatattcgacttcagccgatgtgctggaa
aaactggagaacaagcatgatatcgttaaggagatattgctgtatcgccagcttggcaag
ttgcaatcaacttatattgaagggctgcttaaagtggtcaatggcaaaacggacaaggtg
cacacccggttcaaccaagcgttgacccagaccggccgtttaagttctacagatcccaat
ctgcagaatatcccgatcaggttggaagaaggcaggaaaatcaggcaagccttcattcct
tccgaaaaggattggatcatttttgctgccgattactcacagatcgagttacgcgtcctg
gcgcatatcgccaatgacagcggattggtggaagcattccaggccgggatggacatccat
acaaggacagccatggatgtattccacgtaccggcagagcaagtcacggcgaacatgagg
cgccatgccaaagcggtcaatttcggaatcgtttatggtataagtgactacgggctatcg
caaagtctcggcatcacgagaaaagaagcgggagagttcatcgagaagtatttaagaagc
tttcctggtgttcaggaatatatggaagaaagcatacatgaggcccgtcaaaaaggatat
agcacgactctgatgcaaagaaggcgctatatacctgagataacaagcaggaatttcaac
atcaggagctttgccgaacggacagcgatgaacacgccgattcaaggcagtgccgcagat
atcatcaagctagccatgataaacatgaataagcgcctgaaacgggaaggtcttaaaacg
agaatgcttcttcaggtgcatgatgaattgatttttgaaacgcctcccgaggaactcgaa
atccttaaagtgatcgttccggaggaaatggaaaatgccattgaaatgaacgtgcctctt
aaagtggattatgcttttgggccaacatggtttgatgccaaataa

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