Peribacillus sp. JNUCC41: JNUCC41_03470
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Entry
JNUCC41_03470 CDS
T11068
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj03420
Nucleotide excision repair
perj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC41_03470
03430 Mismatch repair
JNUCC41_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_03470
Enzymes [BR:
perj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC41_03470
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC41_03470
MMR (mismatch excision repair)
Other MMR factors
JNUCC41_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_30
DEAD
nSTAND3
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QOS90847
LinkDB
All DBs
Position
complement(708496..710832)
Genome browser
AA seq
778 aa
AA seq
DB search
MNDEIRQEQERLDEVIETITKQIGKIDGETSQRRKEVVNIRKHFWDDLKVNMDTFDDYLE
TIIGLRQQAQALSEREGAHRYSYKRLSTLRRMQEVPYFGRIDITEEGSALTEHIYIGTST
LTDATGENFIVYDWRAPISSVYYDFPPGPVQYSTPGGMISGMLEKKWQYIIKGGVIESMF
DTSLTIGDEILQQVLGKGTDKHMHSIVATIQREQNRIIRNDCGRLLIVQGAAGSGKTSAA
LQRIAYLLYKNREWLKADQIILFSPNSMFNNYVSNVLPELGEENMQQVTFQEYLDHRLTD
SFQVEDPYEQLEFLLTAADDPSYSTRTASIQFKASIRFFEIIKTYRQSLERSGMIFRGLK
FRGETLVSAKQISERFYNTDTTLRFHNRVEKLKEWLCEMLDETEKSELKKPWVQEEIEYL
SKEDYQKVYNQLEKKRGHTEDSFDDYEKEHKMLARMIVRKKLKTLRKRVKALHFINIKQI
YKQLFDEQIQNELWNEGETPVEREICLSTQKMLDEGKLYYEDATPFLLLKELIVGFQTNT
SIKYVLVDEAQDYSPFQFEFLKRLFPSARMTVLGDFNQAIFAHASERVDFQTLASLYGVT
ETESITLDQSYRSTKQIIEFTRELVPEGHRIKAFEREGEKPVLTQVSSRDELHRKIVAKV
KDFQSREYNTIAIICKSAAESAAAYDALSIHGEFKLVQKGTNEYEQGVVVIPAYLAKGIE
FDAVIIYDASMQTYGDESLRRLFYTACTRAMHNLQIYTVGEASPFLQNDATKRFLLTD
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaaattcggcaggagcaagaacgtttggatgaggtgatcgaaacaataacg
aaacaaatcggcaaaattgatggagaaacttcacagcgcagaaaagaagttgttaatatc
cgtaaacatttttgggatgacctcaaggttaatatggatacttttgatgattacctcgag
accatcattggcttaaggcaacaggctcaagccttgtcagaaagggaaggcgcacataga
tattcctacaagaggttatctacactgcgccgcatgcaggaagtaccttatttcggccgg
atcgatatcactgaagaaggatctgcccttaccgaacatatttatatagggacctccact
cttactgatgcaacaggagaaaatttcattgtctacgattggagggccccgatttcgagt
gtttattatgactttcctcccggccccgtacaatactctactcccgggggcatgatttct
gggatgttggagaaaaagtggcaatatatcatcaaaggaggcgttatcgaatcaatgttc
gatacgagtctcaccattggggatgagatactgcagcaggtgcttggcaaaggaacagat
aagcatatgcacagtattgtggccaccattcaacgggaacaaaataggatcatccggaac
gattgcggacgtctgctcattgttcaaggtgctgccggcagcggtaagacatcagctgcc
ctccaacggatcgcatacttgctctacaagaatcgggaatggctaaaagccgaccaaatc
attttattctctcctaactccatgtttaataactacgtatccaatgtgttgcccgaactt
ggcgaagagaatatgcagcaggtaacattccaggaatacttggatcatcgtctgactgac
tcatttcaagttgaggacccttatgagcaattggaatttttgttgactgcagcggatgat
ccttcctatagcaccaggacagcgagtatccaatttaaggcatcgattcgtttctttgag
atcatcaaaacatacaggcaatcactagaacgatctggaatgatctttagagggttaaag
ttccgcggggaaacgctcgtctccgccaaacaaatctcggaaagattttataacacggac
accaccttacgttttcacaatagggttgaaaagttgaaagagtggttatgtgagatgctt
gatgaaacggaaaagtctgagttgaaaaaaccttgggtccaggaggaaatcgagtacctt
agcaaagaagactatcaaaaggtatacaaccaattggagaaaaaacgcggccatactgaa
gattcctttgacgattatgagaaagagcataaaatgctcgcgcgtatgattgttcgcaag
aaattgaagacattacgcaaacgggtaaaagcacttcatttcatcaatattaagcaaata
tacaagcagctctttgacgaacaaatacagaatgaactgtggaatgagggtgaaacacct
gtcgaaagggaaatatgtttatcaacgcaaaaaatgctggacgaaggtaaactgtattac
gaagacgcgaccccatttttgctgctgaaggagctaattgtaggatttcaaacgaatacc
tcaataaaatacgtgcttgtagacgaagcgcaggattattctccatttcaattcgagttt
ttgaaacggttgtttccttctgcaaggatgaccgtgctcggtgactttaaccaggcaata
tttgcacatgccagcgaacgggtggatttccagactcttgccagtttatacggagtaact
gaaaccgagagtataaccttggatcaaagctatagatccacaaagcagattattgaattc
acacgtgaactagttcctgaaggccatcgaattaaggcattcgaacgtgaaggcgagaag
ccagtactgactcaagtgtccagccgtgatgaattgcaccgcaaaatcgtggctaaagtc
aaagactttcaaagtcgtgaatataataccatcgcaataatctgtaaatccgctgccgaa
agtgccgctgcatacgatgcccttagtatccacggtgaatttaaactcgtacagaaaggc
acaaatgaatatgaacagggggttgttgtcattccggcttatttggccaagggcatcgaa
ttcgatgctgtcatcatttatgatgcatctatgcagacatatggtgatgagagcctgcga
agattgttctacaccgcatgtaccagggctatgcataacctgcaaatatatacggttggc
gaagccagtcctttcttgcaaaacgatgcaacgaagcgtttccttctgacagattaa
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