Peribacillus sp. JNUCC41: JNUCC41_14795
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Entry
JNUCC41_14795 CDS
T11068
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
perj Peribacillus sp. JNUCC41
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_14795 (addB)
Enzymes [BR:
perj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC41_14795 (addB)
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JNUCC41_14795 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QOS88122
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All DBs
Position
3040013..3043510
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AA seq
1165 aa
AA seq
DB search
MSLRFLLGRSGAGKTSNILDEIRSKLAEDPEGNPIIYLVPDQMTFLSEYKLIKTPGLAGM
IRTQVFSFSRLAWRVLQETGGMSRLHLDSVGVNMLIRKIMDDKKEELKMFRRSADKQGFI
AQMELMLAEFKQYCIQPDDIQNYLAETSQAGSGIQDKLHDLELVYQAFEDEMVNKYLDSE
DYFTLLIEKMADSSYIREADIYIDGFYSLTPQELLIVEEMIKLCRSVTISLTLDQPYRHY
APDDLQLFRQTGNLYHHLYQAGLRNGIPISEDRILEGTERFGKSQGLNHLETYFAIRPAK
ALDQSPDVTIAQAVNRRAEIEGVARDILSLVRKKQHRFSDIAILVRNGEAYADILQTVFR
DYQIPLFVDSKRTMLNHPLIELIRSTLEIINGYWRYEPVFRAIKTELLFPLQNNHDRMRE
QVDKLENYVLARGIKGSRWTSKERWTYRRFRGLELEDRNQTDKEMQLEQELNELKQLFTE
PILKLSKRVKKAVNGRELCEALYLYLEELHVPEKLEKLKQEAEEAGDLVSAREHEQTWNA
VVDLLDQFVELLSGEELSLKQFAVIIEAGLESLEFSLVPPAIDQVLVANLDLSRLDDVKT
AFVIGLNEGVLPGKAVSDGIFSDSDREVLLAGGLDVAPSSKVRLLDEEFTAYKAFTTPAE
TLYLSYPLADEEGKALLPSSYLKRVRDVLPNVSDVYYMNDPSDLPAEEQVKYAANHDVAL
SYLAAQLQLKKRNYPIHSLWWDVYNAIMDDETAGPSATKVLSSLFYQNRTKKLSGETSKQ
LYGESILTSVSRMEMFNSCPFSHYAAHGLKLRERQIFRLDAPDIGEMFHGALKMISDYLK
EHDIPWSALTPEQCLELARIAVERLAPKLQNQILLSTNRHHYLRRKLEHVIGRASIVLSE
HAKVSGFAPVGLELGFGKNGELPPLSFTLKNGTKMELIGRIDRVDKAEEDEGVYLRVLDY
KSSEKELNMSEVYYGLALQMLTYLDIVVTHSKSLIGKEAIPAGVLYFHVHNPVVKSKGML
SLDKIEEEIYKSFKMNGLVLDHSNVIQMMDTSLDIENSGKSDIIPAGFKKDGSLLAASKV
ASREEFSLLNHHVRRIYQEAGDRMVDGDVDITPYKLKEKTPCTFCSFKSVCQFDQSLEEN
QFRNLAQKKQNDVLELLRGEGENDE
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcactccgttttttactgggaagatcgggtgcagggaaaacttcgaatatattggac
gaaattcgctccaaattggcagaagatcccgaaggaaatccaattatctacctcgttcct
gatcagatgacgtttctatctgaatataaattaattaaaacaccaggccttgccggaatg
atccggacacaggtttttagttttagcaggcttgcttggcgcgttcttcaggagaccggg
gggatgagccggctgcatttggacagcgttggcgttaatatgttgatacggaagatcatg
gatgataaaaaggaagaattaaagatgtttcgtcgttctgctgataagcaggggttcatt
gcacagatggagctaatgctggctgaattcaagcagtattgcatccaacctgatgacatt
caaaactatttggccgaaacctcacaggccggcagcggcattcaggataaactgcatgat
cttgaattggtctatcaggcttttgaggatgaaatggttaacaaatatttggactccgag
gactacttcactttactgatcgagaaaatggctgattcttcctatataagggaagcggat
atttatatcgatggtttttatagtttgactccacaggaattattgattgtggaagaaatg
atcaagctgtgcaggagtgtaacgatctcgctgacgttagatcagccctatagacattac
gctccggatgatttgcagttgttcaggcaaacgggaaatctatatcatcacctttatcag
gctggattgaggaatggcataccgatttcagaagatcggatcttagaaggaactgaaaga
tttggaaagagccagggactgaatcatctggaaacttactttgccattagacctgccaaa
gcgttagatcagtcgcctgatgtaacgatcgcccaggcagttaaccgcagagccgagatt
gaaggagttgccagggacatcttgtcgctggtcagaaagaaacagcaccgtttcagtgat
attgcgattttagtccggaatggagaagcgtacgcagatattttacagaccgtttttcgg
gattatcaaattcccttgttcgtcgattccaaacggacgatgctgaatcatcctctgatt
gagctgattcgttccactttggagatcatcaatggctattggcgttatgagccggtattt
cgtgcgatcaagacggagcttctatttccgctgcaaaataaccacgatagaatgcgcgaa
caggtagataagctggaaaactatgtgctggcccgtggcattaaaggaagcaggtggacg
tccaaagaacgttggacctaccggcgcttccgcggactggaactcgaggaccggaatcaa
acagataaggaaatgcagcttgaacaagagttgaatgagctgaagcaattatttaccgag
cctatcttgaagctctctaaacgtgttaaaaaggctgttaatggcagggaattgtgtgaa
gccctttatctatatcttgaagaattgcatgtaccggaaaaattggaaaagctgaaacaa
gaggcagaagaagcaggtgatctggtatcggcaagagagcatgagcaaacatggaatgca
gttgtcgacctattggaccaattcgttgaactgctgagcggggaagagctttccctgaaa
caatttgcagttatcattgaagctggtctggagtctcttgaattttctttggtaccgccg
gcaattgaccaagtattggtcgctaatctagatttatcccgcctggatgatgtgaagaca
gcttttgttatcggcctgaacgaaggggttctgccaggaaaagctgtatctgatgggata
ttttcagatagtgatcgtgaggtgctgctggctggtggacttgatgttgccccaagttca
aaagtgcgcctgcttgatgaggagtttacagcgtacaaagcatttactacgcctgcagag
accctttatttatcatatccgcttgccgatgaggaagggaaggcacttttaccctcatcc
tatttgaaacgggtaagggacgtattgcccaacgtgtccgatgtgtattatatgaacgat
ccgtccgatctccctgctgaggaacaggtgaaatatgctgcaaatcatgatgtggcccta
tcgtacctggctgcccaattgcagctgaaaaaaaggaactatccaatccattcactatgg
tgggatgtatataatgccattatggatgatgaaacggccggtccttcagcaactaaggtt
ttatcgagccttttttatcaaaatagaacaaagaaattatctggggaaacaagtaagcaa
ttatacggtgagagcattcttacaagtgtatcccggatggaaatgttcaatagctgcccg
ttttcccattatgccgctcatggcttgaaattgcgggaacggcaaattttccgtttggat
gctccggatataggcgagatgttccatggcgcgttgaaaatgatttccgattatttaaag
gaacatgatattccttggtctgcattgaccccggaacaatgcttggagctggccagaatt
gctgtggagagacttgctcctaaactccaaaatcagattttgttaagtacgaaccgccat
cactatctacgcaggaaactggaacatgtgattggacgggcctctatcgtattaagtgaa
catgcaaaggtgagcggttttgccccagtcggattagaacttggattcggaaaaaatggc
gagcttcccccactttctttcacgttgaaaaacggtacgaagatggaattgatcgggcgg
attgaccgcgtggataaagcggaagaagatgagggtgtctatttgcgtgtgctcgattat
aagtcgagtgaaaaggaactgaacatgagtgaagtgtattatggactcgcactgcaaatg
ttgacatacctagatatcgtcgtcacccattccaagtcgctaataggaaaagaagcgatt
ccagccggcgttttgtattttcatgtgcataatcccgttgttaaatcaaagggaatgctc
agtttggataaaattgaagaagaaatttataaaagttttaaaatgaatggacttgtacta
gatcattcaaatgtcattcagatgatggatacctcgcttgatattgaaaattcgggtaag
tcggatatcattccagccggatttaaaaaggacggatccctccttgcggcttccaaagtt
gccagcagggaagagttttcgcttctgaatcatcatgtgcgccgtatttatcaggaagct
ggtgatcgaatggtcgatggtgatgtggatataacgccatataaattaaaggaaaaaacg
ccgtgtaccttctgttcctttaaatctgtatgccaattcgaccagtcactggaggaaaac
caattcaggaatttggcacagaagaaacaaaatgacgttcttgagctattaaggggggag
ggagagaacgatgagtaa
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