Peribacillus sp. JNUCC41: JNUCC41_16925
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Entry
JNUCC41_16925 CDS
T11068
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
perj Peribacillus sp. JNUCC41
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
perj03032
]
JNUCC41_16925 (topA)
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_16925 (topA)
Enzymes [BR:
perj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JNUCC41_16925 (topA)
DNA replication proteins [BR:
perj03032
]
Prokaryotic type
DNA Topoisomerases
JNUCC41_16925 (topA)
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JNUCC41_16925 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
SAND
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
QOS88511
LinkDB
All DBs
Position
3467322..3469397
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVEHEYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDVDVNSDCRVVFNEITKEAIKE
SFKSPRPINMKLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRMIIDREK
EIKDFIPEEYWTIKADFVKGKEQFEGSFFSLGGEKKELKTEEDVKKVLASLNGGEFTIGA
VAKKERRRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELGKEGTVGLITYMR
TDSTRISDVAKEEVHTFIQNNYGKDYVQAEQRKEKKQTNAQDAHEAVRPTSTLREPGVVK
EFLSRDQFRLYKLIWERFVSSQMSSAVMDTMSIDLHNGEVIFRANGSKIKFPGFMKVYVE
GSDDSVEEKENALPDVKKGDQFFSKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVTLDNKRFIPTELGEIVLELIREFFPDILDAEFTAKMEQEFDSVEEGS
IEWIKVIDEFYKEFAIHLAKAEVEMEKIEIKDEPAGEDCVECGHGMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCKEGNIIERKSKKRRIFYGCDTYPGCDFISWDKPLPRSC
PKCEGTLVEKKLKKGVQVQCMDCDFKEMPQA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatacttagtgattgtggaatcgcccgcaaaggcgaaaacaatagaacgttac
ttgggaaaaaaatataaagtaaaggcttccatggggcatgttcgagatttgcctaaaagt
caaatgggtgtcgatgttgaacatgaatatgagcctaaatatataactatccgcggcaaa
ggcccggttttaaaagaattgaaaaccgctgcgaaaaaagcgaaaaaaatctatctcgcg
gctgaccccgacagggaaggggaagccattgcctggcatttggctcacagtcttgatgtt
gatgttaactctgattgccgtgtggtattcaacgagatcacgaaagaggccatcaaagaa
tcatttaaatcgccgaggccaataaatatgaaattggttgatgcccagcaggcaagaagg
gttttggatcgtttagtcggatacaatataagcccgcttttgtggaaaaaagtgaaaaaa
ggcttaagtgcgggacgggtccaatcggttgctgtacggatgatcattgaccgggagaag
gaaatcaaagatttcatcccggaagagtattggacaatcaaggctgattttgtaaaaggc
aaagaacagtttgaaggttccttcttcagccttggcggagagaagaaggaattaaaaacc
gaagaggacgtcaaaaaagtgctcgcctctttaaatggcggcgaatttacgataggagcc
gtggctaaaaaggaaagaaggcgcaatccagctgccccttttacaacttcttccctacaa
caggaagcggcacgtaaattgaatttccgtgcaaagaaaaccatgatgcttgctcagcag
ctttatgaaggaatcgagcttggcaaggaaggtacagtcgggttaatcacttatatgaga
accgattcaacccggatttccgatgttgcgaaagaggaagtccatacattcatccaaaat
aattatggtaaagattatgttcaggctgaacagcgcaaggagaaaaaacaaacgaatgcc
caggacgcccatgaagcagtcaggccaacaagcacattacgtgaaccgggtgtggtcaag
gagttcttatccagagatcaattccgtctttataaattgatatgggaacgattcgtttct
agtcaaatgtcttcggcagtcatggatacgatgagtatcgacctgcataacggggaggtc
atcttcagggcaaatggttcaaaaattaaatttccgggtttcatgaaggtatatgtcgaa
gggtccgatgactcggtggaagaaaaggaaaatgcacttccggatgtaaaaaaaggagat
caattcttttcaaaagatatcgagccaaagcagcatttcacacagcctccgccccgatat
actgaagcacgtcttgtcaaaaccctagaggaactgggaataggccgtccttctacatat
gctcctaccttggatacgattcaaaaacggggctatgttaccttggataataaacggttc
atcccaactgagcttggtgagatcgttcttgaattgatacgcgaattcttcccggatatt
cttgatgcagagttcactgccaagatggaacaggaattcgacagcgtcgaggaaggcagt
atcgaatggataaaggtcattgatgaattttataaagagtttgcaattcatctggccaaa
gctgaagtcgagatggagaaaattgaaattaaagatgaacctgccggtgaagattgcgtg
gaatgcggacatgggatggtctttaagatggggcgttatggaaagttcatggcatgcagc
aatttcccggattgccgtaacacaaagccaatcgttaaagaaatcggtgtcaaatgccca
aaatgtaaagaaggaaacatcattgaaaggaaaagtaaaaaacgccgcatattttacggg
tgtgatacctaccctggatgtgacttcatatcatgggataaaccgcttccgcggagttgt
ccaaaatgtgaaggtacacttgttgaaaagaaactcaaaaaaggcgtccaggtccagtgc
atggattgtgatttcaaggaaatgccgcaagcatag
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