Peribacillus sp. JNUCC41: JNUCC41_22200
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Entry
JNUCC41_22200 CDS
T11068
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj00630
Glyoxylate and dicarboxylate metabolism
perj00680
Methane metabolism
perj01100
Metabolic pathways
perj01120
Microbial metabolism in diverse environments
perj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JNUCC41_22200 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
JNUCC41_22200 (fdhF)
Enzymes [BR:
perj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JNUCC41_22200 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molybdop_Fe4S4
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_21
Fer4_10
Fer4_8
Fer4_6
Fer4_2
Fer4_9
Fer4_15
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
QOS89426
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Position
complement(4575449..4578412)
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AA seq
987 aa
AA seq
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MPEKVQIKINGVEASLEGNQTILQMLTDSSIEVPNVCYHPSLGPIETCDTCLVSVNGELV
RSCSTKIKAGDVIDTVSPDVKEAQVMAMDKILYNHELYCTVCDYNNGTCEIHNTVKEMRV
NHQSVPFDQKPYEVDRSNPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWEAKRPRVIW
DNNVPINESSCVSCGHCSTVCPCNAMMEKGMEGEAGFLTGIAKQTLRPMIEITKNVETGY
GSILAISDMESAMRDARIKKTKTVCTYCGVGCSFDVWTKDRKILKIEPQVEAPANGISTC
VKGKFGWDFVNSEERLTKPLIREGDAFKEVEWDEALELISRKFTEIKEYHGPDSMAFITS
SKCTNEESYLMQKLARGIIGTNNVDNCSRYCQTPATLGLFRTVGYGGDTGGIKDIEKSEL
VLIIGSNTAESHPVLATRIKRSHKLGKQKLIVADIRKHEMAERSDLFIQPAPGSDIIWLS
AVTKYIVDKGWTDKNFIKNRVNGMEEYIKSLEPYTMEYAEKVTGVAKEDLITLAEAIHEA
GSVASLWAMGVTQHGGGSDTSTAISNLLLITGNYGKPGTGTYPLRGHNNVQGASDFGSMP
DRLPGYEKVTDKNVRAKYENIWGAKIPENPGLNNHEMVEGIHAGTIKAMYLKGEDMGLVD
SNINHVHEAFEKLDFFVVQDIFLSRTAEFADVVLPASPSFEKEGTFTNTERRIQRLYQVF
EPLGDSKPDWQIIMNVANSLGAGWNYEHPSEIMDEAAKLSPLYAGVSYERLEGYKSLQWP
VAPDGKDTPLLFTEAFPFPDGKARLFPVEWTRPIDFGDEFDIHVNNGRLLEHFHEGNMTY
KSKGITYKTPKVFLEVSRELAKDRGLEDGTLVRLTSPYGNAKVQCLVTDRVKDKEVYLPM
NDSGDGAINQLTSSHSDKDTDTPAYKEVQAKMEVLRVKGDNPLPSFNHRNGNPQPQIGVQ
VQKKWAREDYIFPGDLLKIKKEERNRG
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
ttgccagagaaagtacagataaaaatcaatggtgtcgaggccagcctggaaggtaatcaa
acaattttacaaatgctgacggatagctcgattgaagtcccgaatgtttgttaccatcct
agcctgggtcctatcgaaacatgtgatacatgtttagtgagcgttaatggagaacttgta
aggtcttgttccaccaagatcaaggctggggatgtaatcgatacagtttcaccagatgta
aaagaagcacaggtcatggcgatggacaagatattgtataaccatgagctttattgtacg
gtttgcgattataataatggcacttgtgaaatccacaatacggttaaggaaatgagggta
aatcatcaaagtgttccttttgatcagaaaccatatgaagtggatcggtcaaatccattt
tatcgatatgatccggatcaatgcatcctttgcggccgttgtgttgaagcatgtcaagat
gtacaggtcactgaaacattgaccattgattgggaagctaaacgtccacgagtcatttgg
gacaataatgttccaatcaacgaatcatcatgtgtgtcatgtggacactgttccacagtt
tgtccgtgtaatgcaatgatggaaaaaggaatggaaggggaagctggatttttaaccggc
atcgctaaacaaactcttcgacctatgatagaaatcacgaaaaatgtggaaacgggatat
ggttcgattctagcgatttcagatatggaatcagccatgagggatgcaaggatcaagaag
acaaaaacggtttgtacatactgcggggtaggatgcagctttgacgtttggaccaaagat
cgtaaaatcctaaaaatcgaaccgcaagtggaggcacctgcaaatggaatttcgacttgt
gtaaaagggaaattcggatgggatttcgtgaatagtgaagaaagactcacaaaaccttta
attagagaaggagatgcgttcaaggaagttgaatgggatgaagcccttgaattgatttcc
cgtaaattcaccgaaatcaaagagtatcacggaccggattcaatggctttcataacgtct
tccaaatgcaccaatgaagagtcctatttaatgcaaaagctggcaaggggaatcattggc
accaataatgtcgataactgttcccggtattgtcaaacgccggctactttgggattattc
agaacggttggatatggcggggatacaggagggataaaagatatcgaaaagtccgaactt
gtattaatcataggctccaatacagccgaatcccaccccgttttggctaccagaatcaaa
cgttcccataaactaggtaaacagaagctgattgtggcggacatcagaaagcatgaaatg
gctgaacgttccgatctcttcatccagcctgctccggggtcggatatcatttggctgtcc
gccgtgactaaatatatcgtcgacaaaggttggactgataaaaacttcatcaaaaatcgc
gtaaatgggatggaggaatacatcaagtctttagaaccttacacaatggaatatgcggaa
aaagtaacaggtgtagctaaagaagatttaattacgcttgcagaagccattcatgaagcg
ggaagtgttgcatcgctttgggccatgggcgttacccagcatggcggaggaagcgatacg
agtactgcaatttccaatttattgctcataacaggcaactacggtaaacctggaacaggt
acttatcctttacgcggacataataatgtccaaggagccagcgactttggcagtatgccg
gatcgcttgccaggttacgaaaaagtaacggacaaaaacgttcgcgcgaaatatgaaaac
atctggggtgcaaaaataccagaaaacccaggccttaataatcatgaaatggtcgaaggg
attcatgcaggtaccatcaaagcaatgtacttaaaaggagaagatatgggtctggtcgat
tccaatatcaatcatgttcatgaagcatttgaaaaactggacttctttgtggtacaagat
atcttcttatcaagaacggcagaattcgcggatgtcgtcctcccagcaagcccaagcttt
gaaaaagaaggtaccttcacgaataccgaacgccgtattcaacgtctatatcaagtcttt
gaaccgttgggtgactcaaagcccgattggcaaatcattatgaatgtagctaattcgtta
ggagcaggttggaattatgagcacccaagtgaaatcatggacgaagcagctaaactatct
ccattatatgctggagtaagttatgaacgcttggaaggatataaaagtcttcaatggcca
gtggcaccagatggtaaagatacgccgcttttattcacggaagcttttcctttccctgat
ggaaaagcaaggttatttccagtcgaatggaccagaccgattgactttggggatgagttt
gatatccatgtgaataatggccgattgttggaacatttccacgaaggaaacatgacttat
aaatcaaaaggcatcacttacaaaacgccaaaagtattccttgaagtatccagggaattg
gcaaaagatagagggcttgaggatggcactctcgttcggcttacttcaccttatggaaat
gcgaaagtgcaatgcctggttacagatcgtgttaaagataaagaggtttatctgccaatg
aacgattcaggtgacggggcaatcaaccaattgacaagcagccattcagataaagatact
gatacccctgcctataaggaagttcaggcaaaaatggaagtgctcagggtcaaaggagat
aatccattgccgagcttcaaccatcgtaatggtaatccacaaccacagataggtgtacaa
gtacaaaaaaaatgggcccgcgaagattatatattccccggtgacctcttgaaaatcaaa
aaggaggagaggaaccgtggctaa
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