Peribacillus sp. JNUCC41: JNUCC41_23485
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Entry
JNUCC41_23485 CDS
T11068
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj03420
Nucleotide excision repair
perj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JNUCC41_23485
03430 Mismatch repair
JNUCC41_23485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
perj03400
]
JNUCC41_23485
Enzymes [BR:
perj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JNUCC41_23485
DNA repair and recombination proteins [BR:
perj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JNUCC41_23485
MMR (mismatch excision repair)
Other MMR factors
JNUCC41_23485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
DEAD
AAA_30
AAA_14
AAA_11
ResIII
TolB_like
NACHT
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QOS89659
LinkDB
All DBs
Position
complement(4861915..4864173)
Genome browser
AA seq
752 aa
AA seq
DB search
MVSLGNHPDFEQERQRLDFTKRYIDVVIKTSETSKDQFQRNMQEAFGDADWSESGLYSQL
LTTANFFEMSKTELESLRKASKKPYFARVDFERNDSDIGEVLYFGKTSLYQRESQEQIIV
DWRSPIANLYYEGRIGEIEYEAEGETFSGNITLKRQLMIEEGVLEEIRDIDLTTTDELLQ
ESLSKSSSNRLTDIITTIQEEQNKIIRADLNKPIIVQGAAGSGKTTIALHRISYFIYHYK
DLFDPRQLMILAPSRVFIDYISEALPELGVEKVKQFTFSEYVQAAIGKQVKLVADDKLTR
LLEKDDQEINSAVWISGLKGSPVFKYILDEYVKDIFKGFHPNADFYCDKYRLYSAKKFIR
LLEEDYWYLPLYSRLDKLKAILQNEVKLKKKIMLERVVDLYDAKIEKALYRNIDPVIRKD
FVTKCLDKKEERIGQIQKAIRTSVKGYFKQFKSKDLLDYYKELYEDPERLASYSNGKLTV
EDASVLCEYNHKLFSVKSYELEDLGALLYLQERLFGVDKENKAKNVVIDEAQDYSFMQLQ
ALKTAVETDMFTLVGDLAQGIHSYRGLQTWEEVHSRIFPRATYTELQKSYRTTVEIMKQA
NEILQLLTYDFPEVEPVVRHGKDPEFVSIEKEGWEEELIELIASLKEEGFKTFAVIAKTM
KDCKLANEKLKGFHQGFHLIDEAGNIPKDKTLIVPSYQAKGLEFDVVFAISLEEAYCHGN
ELDIKLLYVTMTRPLHRLYFLGNEKNAFLIET
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggtttcattgggtaatcaccctgattttgaacaggaacggcagcggctggattttacg
aaacgttatatcgatgtagtcatcaaaacatcagaaacaagcaaagatcagtttcagcgg
aatatgcaagaagcttttggcgatgccgattggtctgaatcgggcttatattcacagtta
ctgacgacggccaacttttttgagatgtccaaaaccgaacttgaaagtttacgcaaagca
agtaaaaagccttattttgcaagagtggatttcgaaaggaatgacagtgatataggcgaa
gtcctttatttcggaaaaacatcgctttatcagagggaaagccaggaacagatcatcgtc
gattggcgatcgccgattgcaaacctctattatgagggacggattggtgaaatagaatat
gaagccgaaggagagacattcagcgggaatatcactttaaaaagacagctaatgatcgaa
gaaggtgtcttggaggagataagggacattgatttgacaacgacggatgaattattgcaa
gaatccctttccaaaagttccagcaatcgactgacagatatcattaccacgatccaggaa
gaacaaaataaaatcattcgtgcagatttgaataaacctatcattgtccaaggcgcagcg
ggcagtggtaaaactacaattgctttacataggatctcttatttcatttatcactataaa
gacctgttcgatccgcgccaattaatgattcttgctccgagccgggttttcattgattac
atatctgaagctttacctgaattgggtgtggaaaaggtaaaacaattcacattttccgaa
tatgttcaggcagcgataggaaagcaggtgaagcttgtagcggatgataaattaactcga
ttgctggaaaaggatgatcaagaaattaattcagcggtctggatatcaggtctgaagggc
tcccctgtctttaaatatatattggacgaatatgtaaaggatattttcaagggtttccat
cctaatgctgatttttattgtgataaatatcgcctctattccgctaagaagttcattaga
ttattggaagaggattattggtatttaccattatacagcaggctggacaaactgaaggcc
attttacaaaatgaagtgaaattgaaaaagaaaataatgcttgaacgtgttgttgatctt
tatgatgccaaaattgagaaagctctctatagaaatattgatccagtcattcgtaaggat
tttgttacaaaatgcctcgataaaaaggaggaaaggattggtcagatccaaaaggcgatc
cgtacttccgtaaaagggtattttaagcaattcaaaagtaaagatctcttggattactat
aaggagttatacgaagatccggagcgtcttgcctcttacagcaacggtaaacttactgtt
gaagatgccagtgtattatgtgagtataatcataaattattttctgttaaaagttatgag
ctggaggacttaggagcattgttatatcttcaggagcggctttttggtgtcgataaagaa
aacaaagcaaaaaatgtcgtcattgatgaggcacaggattacagcttcatgcagttacag
gcactaaagacggcagtggaaaccgatatgttcactcttgtaggcgatcttgcacaaggc
atccattcataccgcggacttcaaacatgggaagaggttcacagtcgtattttccctcgg
gcaacgtatactgaattacaaaaaagctacagaactactgttgaaataatgaaacaagct
aatgaaatacttcagttgttaacatatgatttcccggaagttgaacctgtagtccgtcat
ggtaaagatccagaattcgtttccattgaaaaggaaggttgggaagaagaacttatcgaa
cttattgcaagccttaaagaagaaggatttaaaacgtttgccgttattgctaaaacgatg
aaagattgcaaactggcaaacgagaaactaaagggattccatcaaggctttcatttaatt
gatgaagctggaaacatccctaaggataaaacgttgattgttccttcctatcaagccaaa
ggtctcgaattcgatgtcgtttttgcaatatccctggaagaagcgtattgccatggaaat
gaacttgatatcaaattgctgtacgtaacaatgacaaggccattgcacaggctttatttt
ttaggtaatgagaaaaatgctttccttatcgagacatga
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