Peribacillus sp. JNUCC41: JNUCC41_25880
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Entry
JNUCC41_25880 CDS
T11068
Symbol
gcvPB
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPB
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
perj Peribacillus sp. JNUCC41
Pathway
perj00260
Glycine, serine and threonine metabolism
perj00630
Glyoxylate and dicarboxylate metabolism
perj00670
One carbon pool by folate
perj00785
Lipoic acid metabolism
perj01100
Metabolic pathways
perj01110
Biosynthesis of secondary metabolites
perj01200
Carbon metabolism
Module
perj_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
perj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JNUCC41_25880 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JNUCC41_25880 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JNUCC41_25880 (gcvPB)
00670 One carbon pool by folate
JNUCC41_25880 (gcvPB)
Enzymes [BR:
perj01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JNUCC41_25880 (gcvPB)
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GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QOS90093
LinkDB
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Position
complement(5359470..5360927)
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AA seq
485 aa
AA seq
DB search
MNNQDQSLIFEISTSGRIGYSLPEMDVATISLEEILPADYIREEEAELPEVSELDIMRHY
TALSKRNHGVDSGFYPLGSCTMKYNPKINENVARFNGFAHIHPYQDPATVQGALGLLFDL
QEHLTEITGMDQVTLQPAAGAHGEWTGLMMIRAFHEANGDTERTKVIVPDSAHGTNPASA
TVAGLETITVKSDENGLVDLEDLKRVVGPDTAALMLTNPNTLGLFEENILEMAQLVHDAG
GKLYYDGANLNAVLSKARPGDMGFDVVHLNLHKTFTGPHGGGGPGSGPVGVKSDLIPYLP
KPLVVKQGEQFVLDYDRPQSIGRVKPYYGNFGINVRAYTYIRSMGPDGLKAVTENAVINA
NYMMRRLEPFFDLPYNRHCKHEFVLSGRRQKKLGVRTLDIAKRLLDFGYHPPTIYFPLNV
EEGMMIEPTETESKETLDAFIDAMIQIAKEAEETPEIVQEAPHTTVIKRLDETLAARKPV
LRFQA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaagatcaatcactcatttttgaaatcagtacttccggtcgaatcggatac
agtctgccagaaatggatgttgcaactatttcgctcgaagaaattcttcctgccgactac
atccgtgaagaagaggcagaacttcctgaggtgtccgaacttgatatcatgcgtcattat
acagcactttccaagcggaatcatggagtggattcgggtttttatccgctgggttcatgc
acgatgaaatataatccgaaaataaatgaaaatgtggcgcgcttcaacggttttgcccat
atccatccatatcaggatccggctactgttcagggagcattgggactattatttgatttg
caggaacacttaacggaaatcaccggtatggaccaagtgacattacagcctgcagcaggt
gctcacggtgaatggactggattgatgatgattcgcgcttttcacgaagcgaatggcgat
acagaacggactaaagtgattgtacctgattctgcacacggtacgaatcctgcctctgca
actgttgccggccttgaaacgattacagtgaagtcggatgaaaatgggttagtcgacctt
gaggatttaaagcgtgttgtcggaccggataccgcggccttgatgctgacgaatcccaat
acattgggattgtttgaagaaaatattttggaaatggcccaacttgtccatgacgcaggt
gggaagctttattatgatggagccaacctgaatgcagttctatcgaaagcacgaccgggt
gatatgggctttgatgtggttcacttaaatctccataaaacattcacaggcccgcatggc
ggcggcggcccgggttctggtcctgtaggggtgaagtcggacttgattccttacttgcct
aaaccgcttgtggtcaaacaaggtgagcaattcgttcttgattatgatcgtccgcaatcc
atcggtagggtaaaaccttattatggtaatttcgggataaacgtgagggcgtatacgtac
attcgttcaatggggccagatggtcttaaagccgtcaccgagaatgcggtcatcaatgcc
aattatatgatgcgtaggttggaaccattttttgacttaccatataatcgtcattgtaag
catgaattcgtattaagcggacgccgtcaaaagaaattaggggtaaggactctcgatata
gccaaaagattgctggatttcggttatcatcctccgaccatttacttcccgttgaacgtg
gaagaaggaatgatgatagaaccgactgaaaccgagtctaaagaaacgctggatgcgttc
atcgatgcgatgatccagattgccaaggaagcggaagaaaccccggaaatcgttcaggaa
gctccgcatacaaccgttataaagcggcttgacgaaactcttgctgcaagaaaacctgtt
ctgcgttttcaagcatag
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