Peribacillus sp. S4: ACJ9PY_00190
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Entry
ACJ9PY_00190 CDS
T11198
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pers Peribacillus sp. S4
Pathway
pers03030
DNA replication
pers03430
Mismatch repair
pers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJ9PY_00190 (holB)
03430 Mismatch repair
ACJ9PY_00190 (holB)
03440 Homologous recombination
ACJ9PY_00190 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pers03032
]
ACJ9PY_00190 (holB)
03400 DNA repair and recombination proteins [BR:
pers03400
]
ACJ9PY_00190 (holB)
Enzymes [BR:
pers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJ9PY_00190 (holB)
DNA replication proteins [BR:
pers03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJ9PY_00190 (holB)
DNA repair and recombination proteins [BR:
pers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJ9PY_00190 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
XMN25511
LinkDB
All DBs
Position
36709..37713
Genome browser
AA seq
334 aa
AA seq
DB search
MVLDKTWQDMSEIQPQVMTMLQNSITKNRVAHAYLFEGEKGTGKQEISYAFAKSLLCEAP
TAGYEPCELCRNCKRISSGNHPDVHLIEKDGLSIKKEQIKGLQEEFSKKSVEADRKVYMI
ADADKMSVGAANSLLKFLEEPSADTVAILMTEQLQRILPTILSRCQVISFKPLSPENVKR
KLIEQELEPQLASVIAHITQNVEAGIELSHDEWFVQAQKIVVKLYEVLKLNSLKAMLYLQ
TDWFTHFKEREQVDRGLDLLLLIYKDLLYIQLDKKDFVVFQNKLKEFETHALHLSPRRLA
EHMGCILEAKRKLMSNTNPQLLMEQLVLNLQEGS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggttttggataaaacatggcaggacatgagtgaaattcagccgcaggtaatgacgatg
ctgcaaaatagcataacgaagaacagggtggctcatgcgtatttatttgaaggagaaaaa
gggacaggcaagcaagagataagctatgcctttgccaaaagcttactatgtgaagccccg
acagcaggttatgagccatgcgaactttgtcggaattgcaaacggatttcaagtgggaat
catccagatgtccatttgatagaaaaagacggtctctcaataaagaaagagcaaatcaag
gggcttcaggaagaattttcgaaaaagagcgtagaggcagatcggaaggtttatatgatt
gccgatgctgacaaaatgtcggtgggggcagccaacagtctattgaaatttttagaagaa
ccttcggctgatactgtagcaatattgatgaccgaacagcttcagaggattctgccgact
atattatcaaggtgccaagtgatttcgttcaagccattatctccggagaatgtgaaacgg
aagttgatagaacaggagttagaaccacagctggcctcagttattgcccacatcacacag
aatgtggaagctggaatcgagcttagccatgatgaatggtttgtacaagctcaaaaaata
gtggtaaaattatatgaagtgttaaaacttaattccttgaaggcaatgctgtaccttcag
acggattggttcacacactttaaagaaagagaacaggttgacagaggtcttgatttgtta
cttcttatatataaggatttattatacattcagttggacaaaaaggacttcgttgtgttc
caaaataaactgaaggaatttgaaactcacgctcttcatctttccccaagacgccttgct
gaacatatgggttgcattttggaagcaaaaaggaagctgatgtccaacacgaatccacag
ctgttgatggaacagcttgtgctgaatttgcaggagggatcatga
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