Peribacillus sp. S4: ACJ9PY_05825
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Entry
ACJ9PY_05825 CDS
T11198
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pers Peribacillus sp. S4
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pers03019
]
ACJ9PY_05825 (yhaM)
Messenger RNA biogenesis [BR:
pers03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACJ9PY_05825 (yhaM)
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF2130
Motif
Other DBs
NCBI-ProteinID:
XMN26480
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All DBs
Position
1216798..1217736
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AA seq
312 aa
AA seq
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MGNGIIHYGIGEVVDIYMYIKTSTKAVASNGKPFLTLILCDKTGEIEAKLWDVSEADEKT
YCAEATVKVQGEVQNYRGRSQLKIRNIRITSDTDGVTKADLIQTAPLSQEEMMETITQFI
FEMRNPNIQRVTRHLIKKYQNEFLTFPAATKNHHEYMSGLAYHVVSMLGLAKAISTLYPS
LNKDLLYAGVILHDLGKVHELSGPVSTVYTVEGNLLGHITIMVNEVGKAAEELGIEAEEI
MILKHLILSHHGKAEWGSPKPPMVREAEVLHYIDNMDAKINMMDRALEKVKPGEFTERVF
ALDNRSFYKPTF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgggatcatacactacggaattggtgaagtagtagatatatatatgtacatt
aaaacgagtacaaaagcggtggcaagtaatggaaagccttttttaacattgattttgtgc
gataaaaccggcgagatagaggcaaagctatgggatgtttccgaggctgatgagaaaaca
tactgtgcggaagcaacagtgaaagttcaaggggaagtccagaattatcgaggacgcagc
caattgaaaatccgtaatattagaattacttcagatactgacggggtcacgaaagccgat
ttaattcaaacggcgcctttaagtcaggaagaaatgatggaaaccatcactcaatttatt
tttgaaatgaggaatccgaatatccaaagggtgactaggcatctcataaaaaaatatcag
aatgaattcctgacgttccctgctgccaccaagaaccatcatgagtatatgtcgggactg
gcctatcacgttgtatcgatgctagggctggctaaggccatttcaaccctatatccttcc
ctcaataaggatcttttgtatgcaggggtcattctgcatgaccttggaaaggtgcatgag
ctatctggacctgtttcgactgtttatacagtggaagggaacttgttggggcatatcacc
atcatggtgaatgaagtcggtaaagctgcagaggaattgggcattgaagcggaagaaatc
atgattctcaagcacttgatattaagccaccatggtaaagctgagtggggcagtcccaag
ccgccgatggttagggaagcggaagtgctgcattatattgataatatggatgccaagata
aatatgatggaccgcgccttggaaaaagtgaagccgggtgaatttacggaaagagtcttc
gcgctcgataatcgttcattctataaaccgacattttaa
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