Peribacillus sp. S4: ACJ9PY_08210
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Entry
ACJ9PY_08210 CDS
T11198
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pers Peribacillus sp. S4
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pers03032
]
ACJ9PY_08210 (topA)
03400 DNA repair and recombination proteins [BR:
pers03400
]
ACJ9PY_08210 (topA)
Enzymes [BR:
pers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACJ9PY_08210 (topA)
DNA replication proteins [BR:
pers03032
]
Prokaryotic type
DNA Topoisomerases
ACJ9PY_08210 (topA)
DNA repair and recombination proteins [BR:
pers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACJ9PY_08210 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
SAND
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
XMN26909
LinkDB
All DBs
Position
1689734..1691809
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVEHEYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLDVDVNSDCRVVFNEITKEAIKE
SFKSPRPINMKLVDAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRMIIDREK
EIKDFIPEEYWTIKADFVKGKEQFEGSFFSLGGEKKELNTEEDVKKVLASLNGGEFTIGA
VAKKERRRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIELGKEGTVGLITYMR
TDSTRISDSAKEEVHTFIQNNYGKEYVQVEQRKEKKQTNAQDAHEAVRPTSTLREPGVVK
EFLSRDQFRLYKLIWERFVSSQMSSAVMDTMSIDLHNGDVIFRANGSKIKFPGFMKVYVE
GSDDSVEEKENALPDVKKGDQFFSKDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVTLDNKRFIPTELGEIVLELIREFFPDILDAEFTAKMEQEFDSVEEGN
IEWIKVIDEFYKEFAIHLAKAEVEMEKIEIKDEPAGEDCVECGHGMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCKEGNIIERKSKKRRIFYGCDTYPGCDFISWDKPLPRSC
PKCEGTLVEKKLKKGVQVQCMDCDFKEMPQA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatacttagtgattgtggaatcgcccgcaaaggcgaaaacaatagaacgttac
ttgggaaaaaaatataaagtaaaggcttccatggggcatgtacgcgatttgcctaaaagt
caaatgggtgtcgatgttgaacatgaatatgaacctaaatatataactatccgcggcaaa
ggcccggttttaaaagaattgaaaaccgctgcaaaaaaagcgaaaaaaatctatctcgcg
gctgaccccgacagggaaggggaagcgattgcctggcatttggctcacagtcttgatgtt
gacgttaactcggattgccgcgtggtattcaacgagatcacgaaagaggctatcaaggaa
tcatttaaatcgcctaggccaataaatatgaaattggttgatgctcagcaggcaagaagg
gtcttggaccgtttggtcggatacaatataagcccgttattgtggaaaaaggtgaaaaaa
ggcttaagcgcgggacgggtccaatcggttgctgtacggatgatcattgaccgggagaag
gagatcaaagattttattccggaagagtattggacaatcaaggctgattttgtaaaaggg
aaagaacagtttgaaggttctttcttcagccttggcggcgagaagaaggaattaaatacc
gaagaggacgtcaaaaaagtgctcgcttctttaaatggcggcgaatttacgataggagcc
gtggctaaaaaggaaagaaggcgcaatccagcagcaccttttacaacttcttccctgcaa
caggaagcggcacgtaaattgaatttccgtgcgaagaaaaccatgatgcttgctcagcag
ctttatgaaggaatcgagcttggcaaggaaggtacagtcgggttaatcacttatatgaga
accgattcgacccgtatttcagatagtgccaaagaggaagtccatacgttcattcaaaat
aattatggtaaagaatatgttcaggtcgagcagcgcaaggagaaaaaacaaactaatgcc
caggacgcgcatgaagcggtcaggccaacaagcacattacgtgaaccgggtgtagtcaag
gagttcttatccagagatcaattccgtctttataaattgatttgggaacgattcgtttcc
agtcaaatgtcttcggcggtcatggatacgatgagcatcgacctgcataacggggatgtc
atcttcagggcaaatggttcaaaaattaaatttccgggtttcatgaaggtatatgttgaa
ggatccgatgactcggtggaagaaaaggaaaatgcacttccggatgtgaaaaaaggagat
caattcttttcaaaagatatcgagccgaagcagcattttacacagcctccgccccgatat
actgaagcccgtctggtcaagaccctagaggaactgggaataggccgtccttctacatat
gcgcctaccttggatacgatccaaaaacggggctatgttaccttggataataaacggttc
atcccgacagagcttggtgagatcgttctcgaattgatacgcgaattcttcccggatatt
ctcgatgcagagttcactgccaagatggaacaggaatttgacagcgttgaggaaggcaat
attgaatggattaaggtcatcgatgaattttataaagaatttgccattcatttggccaag
gccgaagtcgagatggagaaaattgaaatcaaagatgaacctgcaggtgaagattgcgtg
gagtgcggacatgggatggtctttaagatgggacgttatggaaagttcatggcatgcagt
aatttcccggattgccgtaacaccaaaccaatcgtcaaggaaatcggggtcaaatgccca
aaatgtaaagaaggaaatatcattgaaaggaagagtaaaaaacgacgcatattttacggg
tgtgatacctaccctggatgtgacttcatatcttgggataaaccgctgccgcggagttgt
ccaaaatgtgaaggtacacttgttgagaaaaaactcaaaaaaggagtccaggtccagtgc
atggattgtgattttaaagaaatgccccaagcatag
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