Peribacillus sp. S4: ACJ9PY_17710
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Entry
ACJ9PY_17710 CDS
T11198
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pers Peribacillus sp. S4
Pathway
pers02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACJ9PY_17710 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pers03021
]
ACJ9PY_17710 (rpoD)
Transcription machinery [BR:
pers03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACJ9PY_17710 (rpoD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
DUF2408
Motif
Other DBs
NCBI-ProteinID:
XMN23832
LinkDB
All DBs
Position
complement(3726429..3727562)
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AA seq
377 aa
AA seq
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MAEKPARSKQVDNEFSLEQVKEKLLELGKKRGSLTLEKIAEMIGGFELDSDQMDEFYEVL
AENGVEILTDGEEDEDEDDPDEKKLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDL
LSAEEEISLATRIEDGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKA
VEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLG
REPSPEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHA
AYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKAL
RKLRHPSRSKRLKDFLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcacgttccaaacaagttgataatgaatttagccttgaacaggtg
aaagaaaaactactagagctaggtaaaaaacgaggctctttgactttagaaaaaatcgct
gaaatgattggcggttttgagttggattccgatcaaatggatgagttctatgaggtgtta
gcagaaaacggcgtcgaaatactcactgatggtgaggaagacgaagatgaagatgatcca
gatgagaagaaacttgcaaaagaagaagagtttgacttaaatgatttaagtgttcctcct
ggcgtgaaaattaatgacccagtacgcatgtatttaaaggaaattggccgggtcgacctt
ttatctgcagaagaggaaatctctttggcgacgagaattgaagatggagatgaagaagcg
aaacgccgtttggcagaagctaatctacgtcttgttgtcagtatcgccaagcgttatgtc
ggacgcggaatgcttttccttgatttgattcaggaaggtaatatgggacttatcaaagct
gtggaaaaatttgattaccgcaagggattcaaattcagtacgtatgcaacatggtggatt
cgccaagcgataacccgtgccattgccgaccaagcaagaacgatccggataccggtgcat
atggtggaaaccatcaataaattgattcgtgtccaaagacagcttcttcaggatttagga
cgtgaaccttcaccggaagaaattgcggaggatatggacctgactcccgaaaaagttcgt
gaaatcttgaaaatagctcaggagcctgtttcattggaaacgccaataggtgaagaagac
gattcacatttaggtgatttcattgaagatcaggatgcgacttccccatcggagcatgca
gcatatgaactattgaaagaacagcttgaagacgtattggatactcttactgaccgtgaa
gagaacgtcttgagactccgctttggacttgatgatggccgtacccgtactcttgaagag
gtaggtaaagtgtttggggtcacccgcgagcgtatccgtcaaatcgaagcgaaggcgctg
cgtaaactgagacatccaagccgaagcaaacgattgaaagatttccttgaatag
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