Peribacillus sp. S4: ACJ9PY_19330
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Entry
ACJ9PY_19330 CDS
T11198
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pers Peribacillus sp. S4
Pathway
pers03030
DNA replication
pers03430
Mismatch repair
pers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJ9PY_19330 (dnaE)
03430 Mismatch repair
ACJ9PY_19330 (dnaE)
03440 Homologous recombination
ACJ9PY_19330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pers03032
]
ACJ9PY_19330 (dnaE)
03400 DNA repair and recombination proteins [BR:
pers03400
]
ACJ9PY_19330 (dnaE)
Enzymes [BR:
pers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJ9PY_19330 (dnaE)
DNA replication proteins [BR:
pers03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACJ9PY_19330 (dnaE)
DNA repair and recombination proteins [BR:
pers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACJ9PY_19330 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Proho_convert
HROB
DNA_pol_IIIA_C
YxiF
Fanconi_C
Motif
Other DBs
NCBI-ProteinID:
XMN24133
LinkDB
All DBs
Position
complement(4076891..4080250)
Genome browser
AA seq
1119 aa
AA seq
DB search
MYTHLHIQSGYSLLTSTVKITELVAKAKADGCTSLALTDRNVMYGSVYFYKECKKQGIKP
IIGILADVLDERESPHGLLLLAKSLQGYQNLLKISSAIKTKSPSGIPMNWLKAYSGGLIA
VTPGAEGQIETLLREENPEEAKQAAGRFLQIFGHDNFYVSIQRLSIADEEKSNEAISQLA
RDLEIKIVATNPVYYLNESDALAHEVLLAIGNGDKLADETHTVLESDQFYLKSRSQMAEL
FHDRPDALENTLHIAAQCNLEIPFHRSLLPKYPTEDGATAEEMLEAICFQGLKKRVPEPS
IQYEERLRYELDIITKMKFSDYFLIVWDFMKFAKDHQILTGPGRGSAAGSMVAYVLSITD
VDPIEHSLLFERFLNPERVSMPDIDIDFPDNRREEVIAYVAKKYGELHVAQIITFGTLAA
KAALRDTGRVFGLNSKEQEAVSKMIPGRLGITLPEAFKESKRLRDFVNESDLNQKLFQTA
LLLEGLPRHASTHAAGVVISDQALTGHIPIQGGHDGIHLTQYPMDLLEELGLLKMDFLGL
RNLTLIDNILNNIKKGTGKKLDLSHIPMDDPETLATLGRGETTGVFQFESDGIRKVLIKL
KPNRFEDIVAVNALYRPGPMENIPLFIERKHGLASIDYLHEDLKDILEPTYGVIVYQEQI
MQIASRLAGFSLGEADLLRRAVSKKKKDVLDRERQHFVSGALKQGYSEKTADEIYSLIVR
FANYGFNRSHAVAYSFIAYQLGYLKTHYPEYFMAALLTSVVGNDEKISQYIREAKKKGIA
VLPPSINRSGYPFLPEKEGIRYSLGAIKGIGGTVLKDIFAARRQKKFADLFDFCLRVSGK
IVNRKVLEALVHSGAFDEFGEDRATLLASLDVAINHTELVNPDDDLFDMFSDGEFSLKPK
YHRVDPIPIEDKLSLEKSALGLYLSNHPVTSYRELFQHFGCLTIDEAINKKESKVLLGAY
ITSVKTIRTKKGDVMAFLSVSDEEGDIEAVVFPNVYKNHSADLNHGQLVMLQGTLEERDG
KTQLLIRSVYPLEKVKQMKEEKNGTIFLKIEAGKQTKDTLQKIKKNLMQHSGETKVMLFY
ERENRYVQLSYWDWVNPTDRLMQALFDLVGKGNVVYKKE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
gtgtatactcatctccatattcagagcggatacagcctgctgacaagtacggtgaagatc
actgaacttgtggccaaagcgaaagcggatggctgtacaagtcttgccttaaccgatcga
aatgttatgtacggttcggtctatttttataaagaatgcaagaagcagggcataaagccg
atcatcggcatacttgcggatgtccttgatgaacgggaatcgccacatggacttctttta
ttggcaaagagtctgcaaggatatcaaaacctgcttaaaataagcagtgccataaaaacg
aaatccccgtcaggcattccaatgaattggcttaaagcctattccgggggcttgattgca
gtcacaccaggtgcagaggggcagatagaaacgctattgagagaagaaaaccctgaagaa
gccaaacaggcagcagggcgatttctgcaaatttttggtcatgataacttttatgtatcc
atacagagactgtcgattgcggatgaggaaaaaagtaacgaagccataagtcagttggcg
agagatttagagatcaagattgtcgcgacgaatccagtttattatttgaacgaaagcgat
gcactcgctcatgaagtcttattggcaatcggaaatggcgacaagctggcggatgagacg
catacggttcttgaatccgatcaattttatttgaaaagccggtctcagatggcagaacta
ttccatgacagaccggatgcactcgaaaatacactgcatattgccgcgcaatgcaatctg
gaaattccatttcatcgttcacttcttcctaagtaccctactgaagatggagccacagcc
gaggaaatgctcgaagccatctgcttccaagggctgaagaaaagagtgccggagccatcc
attcaatatgaagagcgactaagatatgaattggatatcatcaccaagatgaaattcagc
gattactttttaatcgtttgggacttcatgaaattcgctaaggaccaccaaatcctgact
ggtccaggaagggggtcggccgcaggatcgatggtcgcttatgtgctgtcgatcacggat
gtcgatccaatcgaacattccttgctgttcgagcgtttcctgaatccggaacgtgtctcg
atgccggatatcgacattgactttccggataaccgccgtgaagaagtgattgcctatgtc
gcgaagaaatacggggaacttcatgtagcacagatcattacattcgggacattggctgca
aaggctgcgttaagggatacaggacgtgttttcggcctgaattcaaaggaacaggaagcg
gtatcgaaaatgattccaggccgtctgggcatcacgcttcccgaggctttcaaggaatcg
aaaaggcttagggatttcgttaatgagagtgacctgaatcaaaaactatttcaaaccgcg
ttattgcttgaagggctgcctcgccatgcttcgacacatgccgccggcgtcgtcatcagt
gaccaggcactgaccgggcatatcccgattcagggagggcatgacggcatccacctgact
caatatccaatggaccttctcgaagaactgggacttcttaaaatggattttcttggactc
cgcaatttaacgctaatcgataatattttaaataacattaaaaaaggaacagggaaaaag
ctcgacttgtcccatattccgatggatgatcccgagacgctggccactttaggcagaggc
gaaacaaccggggtgttccaatttgaatcggatggcatccgaaaggttttgatcaagctg
aaaccgaaccgattcgaggatatcgttgcggtcaatgccctatatcgtccaggtccgatg
gaaaatataccgctgttcatcgagcgaaaacatggacttgcttcgattgattaccttcac
gaggatttgaaggatatcctcgagcctacatatggggtcatcgtatatcaagaacaaatc
atgcaaatcgcctcccgtttagccgggttttcattaggggaggctgacctgctccgacgt
gccgtttcgaagaagaagaaggatgttctggatcgagagcggcagcatttcgtgagcggc
gcattgaaacaaggatactccgaaaaaacggcagatgagatttattccttgattgtccgc
ttcgctaactatggattcaaccgaagtcatgcggtggcgtatagcttcatcgcttatcag
ctgggttacttgaaaacccactatccggaatatttcatggcagcacttttgacatcggtt
gtcgggaatgatgaaaagatttcgcaatatatccgagaagcaaaaaagaaagggatagcg
gttctgcctccctcgattaaccggagcggttacccgtttttaccggaaaaggaagggatc
cgttatagccttggagccataaaagggataggcgggacggtcctaaaagatatcttcgct
gcaaggcgtcagaagaagttcgcagatttattcgatttctgtttgcgcgtttcggggaaa
atcgtaaatagaaaagtgttggaggcgcttgtccattcaggtgcatttgatgaattcggt
gaagaccgggcaacattgttggcgagcttggacgtagcgatcaatcatacggaattggtt
aatccggatgatgacctattcgatatgttttcggatggcgagttttcactcaaaccgaaa
taccaccgggtcgatcctatcccaatcgaggacaaactctcgttggaaaaaagcgcattg
gggctttatctatcgaatcatcctgtgacaagctacagagaactttttcagcacttcggc
tgtttgactatagatgaagctattaataaaaaggaatcgaaagtcttacttggcgcttac
attacgtcggttaaaaccataaggacaaaaaagggcgatgtgatggctttcttgagcgtc
agtgatgaagagggggatattgaagcggtcgtatttccaaatgtttataaaaaccactct
gccgacttgaatcatggacaactcgttatgctgcaagggacattggaagagcgggatgga
aaaacacagctgctgatccggagcgtatacccgcttgaaaaagtgaagcagatgaaagag
gaaaaaaacggaacgatattcctgaaaattgaggctggcaagcaaacgaaggatacactg
caaaaaataaaaaaaaatttaatgcagcatagcggtgaaaccaaggtcatgcttttttac
gagagggaaaaccgctatgtacagctatcttattgggattgggtcaatcctacagataga
ctgatgcaggcattatttgacttggtgggaaaagggaatgtggtttacaagaaagaataa
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