Candidatus Sodalis pierantonii: SOPEG_0071
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Entry
SOPEG_0071 CDS
T03006
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SOPEG_0071 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pes03021
]
SOPEG_0071 (rpoA)
03400 DNA repair and recombination proteins [BR:
pes03400
]
SOPEG_0071 (rpoA)
Enzymes [BR:
pes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOPEG_0071 (rpoA)
Transcription machinery [BR:
pes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SOPEG_0071 (rpoA)
DNA repair and recombination proteins [BR:
pes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SOPEG_0071 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AHF72848
UniProt:
W0HL71
LinkDB
All DBs
Position
complement(68010..68963)
Genome browser
AA seq
317 aa
AA seq
DB search
MVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKE
GVQEDILEILLNLKGLAVGVQGKDDVVLTLNKSGIGPVTAADITHDGDVEIVKLQHVLCH
LTDENASINMRIKVQRGRGYVPASARIHSEEDGRPIGRLLVDACYSPVERITYNVEAARV
EQRTDLDKLVFEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPI
LLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGL
SLGMRLENWPPASIADE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ctggtagatatcgagcaagtcagttcgacgcacgccaaggtgacccttgagcccttagag
cgaggctttggccatactctgggtaacgcactgcgccgtattctgctttcatcgatgccg
ggttgcgcggtgaccgaggttgagattgatggtgtactgcacgagtacagcaccaaagaa
ggtgtacaggaagacatcctggagattctgctcaacctgaaagggctggcggtgggagtt
caaggtaaagatgacgttgtcttgaccctgaataaatctggcattggccctgtgaccgca
gccgacatcacccatgatggggatgtcgaaatcgtcaagctgcagcatgtcctgtgccac
ctgaccgatgaaaacgcatccatcaatatgcgtatcaaggttcagcgtggacgtggttat
gttccggcttctgcccgaattcattcggaagaagatgggcgcccgatcggtcgtctgctg
gtagacgcatgctatagccccgtagagcgtatcacctacaatgtggaagcagcgcgcgtt
gagcagcgtaccgacctggacaagctggttttcgaaatggaaaccaacggcacgatcgat
cctgaagaggcgatccgccgtgcggcaaccattctggctgaacaactggaagctttcgtt
gacttacgtgatgtacgtcagccggaagtgaaagaagagaaaccagaattcgatccgatc
ctgctgcgccccgttgacgatctggaattgactgtccgctctgctaactgcctcaaggca
gaagctatccactacatcggtgatctggtacagcgcaccgaggttgagttgctgaaaacg
cccaaccttggtaaaaaatctcttaccgagatcaaagacgtgttggcttcccgtgggttg
tctctgggcatgcgccttgagaactggcctccggcaagtatcgctgatgaataa
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