Candidatus Sodalis pierantonii: SOPEG_0328
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Entry
SOPEG_0328 CDS
T03006
Symbol
xerC
Name
(GenBank) site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pes
Candidatus Sodalis pierantonii
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pes03036
]
SOPEG_0328 (xerC)
Chromosome and associated proteins [BR:
pes03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SOPEG_0328 (xerC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AHF73009
UniProt:
W0HH52
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All DBs
Position
complement(317152..318063)
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AA seq
303 aa
AA seq
DB search
MTDTRSPLWPQVDAFLQYLRVERQLSAKTRESYLRQLATLIAMASEMGLTEWRQLEVSQV
RALATRSKRQGLQPASLALRLSALRSFLDWLVSIGQLGANPARGVPAPRHGRHLPKNMDV
DEVDHLLDIDTHDPLALRDRAMLEVMYGAGLRLAELVGLNCADVDLSGGEVRVVGKGNKE
RKLPIGATAVAWLRRWLALRDQYTPQNDAVFIAQRGGRISARNVQKRFAEWGVKQGVNSH
IHPHKLRHSFATHMLESSGNLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKR
GKI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacccgctctccgctctggccgcaggtcgatgccttcctgcaatatttgcgg
gtggagcggcagctgagcgccaaaacgcgggaaagttatcttcggcagttggccactctt
atcgccatggcttccgagatggggcttacggaatggcggcaactggaggtaagccaggtg
cgcgcgttggccacccgcagcaagcgccagggattacagcccgccagtctggcgctgcgg
ctttccgcgctgcgcagttttctggactggctggtgagcatcggtcagttgggcgcaaac
ccggcgcgaggtgttcccgcgccgcgccacggccggcatctgccgaaaaatatggatgtc
gacgaagttgaccacctgctggatatcgacacccacgatcctctggcgctgcgcgaccgt
gcgatgctcgaggttatgtacggagccgggctgcggctagcggagctggtcggcctcaat
tgcgcagacgttgatctcagcggcggcgaagtgcgggtggtgggtaaaggcaataaagaa
cgaaaactgcccatcggcgccaccgccgtggcctggttgaggcgctggctggcgctgcgt
gaccaatacacgcctcaaaatgacgcggtgtttatcgcccagcgcgggggacgtatttcc
gcgcgtaatgtgcagaaacgctttgccgaatggggcgtgaagcagggggtaaatagtcat
atccatccgcataagctgcgccactccttcgctacccatatgctggagtcgagcggcaat
ttgcgcgcggtgcaagagctgctcggccacgccaatctcagcaccacccagatctatacc
caccttgatttccagcatctggcatcggtgtacgatgccgcgcacccacgagccaaacgg
ggaaaaatctga
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