Candidatus Sodalis pierantonii: SOPEG_0353
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Entry
SOPEG_0353 CDS
T03006
Symbol
rimN
Name
(GenBank) YrdC/Sua5 family protein required for threonylcarbamoyladenosine (t(6)A) formation in tRNA
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
pes
Candidatus Sodalis pierantonii
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pes03009
]
SOPEG_0353 (rimN)
03016 Transfer RNA biogenesis [BR:
pes03016
]
SOPEG_0353 (rimN)
Enzymes [BR:
pes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
SOPEG_0353 (rimN)
Ribosome biogenesis [BR:
pes03009
]
Prokaryotic type
Other maturation factors
SOPEG_0353 (rimN)
Transfer RNA biogenesis [BR:
pes03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SOPEG_0353 (rimN)
Prokaryotic type
SOPEG_0353 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AHF73023
UniProt:
W0HLR3
LinkDB
All DBs
Position
complement(340234..340806)
Genome browser
AA seq
190 aa
AA seq
DB search
MKNETLLPDLTNVVTALRQQQVIAYPTEAVFGLGCDPDSESAVQALLKLKQRPWQKGLIL
VAEHYAQLTDYIDDSALDNAARERMFACWPGPVTWVVPARPTTPRWLTGQYASLAVRVSA
FEPVRRLCLAFGKPLVSTSANLIGLPPARTAGEVREQLGAVFPVLDEAVEGRCNPSEIRD
ALSGELIRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgaaactctcttgcctgacctgacaaatgtagtgacggcgctgcgccagcag
caggttatcgcttatccgacagaggccgtgttcgggttaggctgcgatccggacagcgaa
agcgcggttcaggcgctgctcaagctaaaacagcgcccgtggcaaaaagggttgatcctg
gttgccgagcattacgcccagctcacggattatattgacgacagcgcgttggataatgcc
gcgcgggagcggatgttcgcctgttggccgggccccgttacttgggtggtaccggcccgc
cccacaacaccgcgctggttaacggggcaatacgcatcactggcggtacgcgtcagcgca
tttgaaccagtgcggcgtctttgcctagctttcggcaagccgctggtgtccaccagcgct
aatttgatcgggctgccgccggcgcgtaccgccggcgaagtgcgtgagcaattaggcgcc
gtttttccggtactggacgaagcggtggaggggcggtgcaatccttctgaaattcgcgat
gccctaagcggcgaattaattcgccagggctga
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