Candidatus Sodalis pierantonii: SOPEG_1031
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Entry
SOPEG_1031 CDS
T03006
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pes
Candidatus Sodalis pierantonii
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pes03021
]
SOPEG_1031 (rpoS)
Transcription machinery [BR:
pes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SOPEG_1031 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AHF73392
UniProt:
W0HLL0
LinkDB
All DBs
Position
1056265..1057254
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AA seq
329 aa
AA seq
DB search
MSQNTLKVNELHEEAEFDENGAETFDEKALVDEPADNDLAEEELLSQGASQRVLDATQLY
LGEIGYSPLLTAEEEVYFARRALRGDIASRRRMIESNLRLVVKIARRYSNRGLALLDLIE
EGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVHLRT
ARELSHKLDHEPSAEEIAEQLDKPVEDVSRMLRLNERITSVDTPLGGDSEKALLDILSDE
KGSGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVSREIGLTRER
VRQIQVEGLRRLREILQGQGLNIEALFRE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttacatgaagaggccgaattcgatgagaat
ggggctgaaacatttgacgagaaggcgctagtcgatgagcctgctgataatgatttagct
gaagaagagctgctgtctcagggggcaagccagcgtgttctggacgccacgcagctctat
ctgggcgagattggatactccccgcttcttaccgctgaggaagaggtctactttgcacgg
cgcgcacttcggggtgatattgcctcacgtcgccggatgatcgaaagcaacctgcggttg
gtggtgaaaattgcccgtcgttacagtaatcgcggactggcgttactggatttaatcgag
gaaggcaacctcggtctgattcgtgcggttgagaagttcgatccggaacggggatttcgt
ttctcgacctacgccacctggtggattcgccagacgatcgaacgggccatcatgaatcaa
acccggactatccgtctgccgatccatatcgtgaaagagctgaacgtccatttacgcacc
gcgcgtgaactgtcgcacaagctcgatcacgagccgagcgcggaagaaatcgccgagcag
ctggataagcccgtggaagacgttagccgtatgctgcgcctgaatgagcgtatcacctcg
gtggataccccgctggggggcgactccgagaaggcgttgctggatattctgtccgatgaa
aaaggcagcggtccggaagacaccacgcaggacgatgacatgaagcagagcatcgttaag
tggctgttcgagctgaatgccaagcagcgtgaagtgctggccagacgtttcggcctgctg
ggctatgaagccgcgacgcttgaagatgtaagccgtgaaatcggtctgacccgcgaacgc
gtgcgtcagattcaggtggaagggttgcgtcgtctgcgggagatcctgcagggtcaaggt
ttgaatatcgaagcactgttccgcgaataa
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