Candidatus Sodalis pierantonii: SOPEG_1267
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Entry
SOPEG_1267 CDS
T03006
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pes
Candidatus Sodalis pierantonii
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pes03016
]
SOPEG_1267 (truB)
Enzymes [BR:
pes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOPEG_1267 (truB)
Transfer RNA biogenesis [BR:
pes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOPEG_1267 (truB)
Prokaryotic type
SOPEG_1267 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5791
Motif
Other DBs
NCBI-ProteinID:
AHF73555
UniProt:
W0HMZ5
LinkDB
All DBs
Position
1307157..1308098
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AA seq
313 aa
AA seq
DB search
MGRPSRRGRDIDGIVLLDKPLGLSSNDLLQKVKRLFHANKAGHTGALDPLATGMLPVCLG
EATKFSQHLLDADKRYRVTARLGERTDTSDAEGQTVSVRPVSLDQARLEAALDHFRGESR
QVPSMFSALKHQGRPLYEYARKGITVERESRPIHVYDLQLHHWDLTEVELEIHCSKGTYI
RTIIDDLGERLGCGAHVTALRRLAVARYPTERMVTLAALQATAADAPETPETLAQLDALL
LPMDSAVADMSAVNLPSDVAARVRLGQTVAVTAQPQAGLVRLTEGDAGRFFGIGEIAAPG
RLTPRRLIAEPRA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtccaagtcgccgtggccgtgatatcgacggcatcgtcttgctggataaaccg
ctcgggctttcgtccaacgatctgctgcaaaaggtaaaacgcctgtttcacgccaacaaa
gctgggcataccggcgcgctggatccgctggcgaccggcatgctgcccgtctgcctcggc
gaggcgaccaagttttcccagcatttgctggacgccgataaacgctaccgggtgaccgcc
cggctcggcgaacgcaccgatacctccgatgccgaaggccagacggtcagcgtccggccg
gtatcgctggaccaagcgcggctggaggcggcgctggaccacttccgcggcgaaagccgg
caggtgccgtcgatgttttcggcgctaaagcatcaggggcggccgctgtacgagtacgcc
cgcaaaggtattaccgtagagcgcgagtcgcgccccatccacgtatacgatttgcagtta
caccattgggacctgacggaggtggaactggaaattcattgttccaaaggcacctacatc
cgcaccattatcgatgatttgggtgaacgtctcggctgcggcgcgcacgtcacggcgctg
cgtcggttggcggtcgcccgctatcccaccgagcgtatggtaacgcttgcggcgctgcag
gccaccgccgccgacgcgccggagacgccggaaaccctggcgcaactggatgcgctgctg
ttgccgatggacagcgcggtggcggatatgtcggcggttaatctgccgtctgatgtcgcc
gcgcgggtccggcttgggcaaacggtagcggttacagcgcagccacaggccggtctggta
cgcttgaccgagggggacgccgggcgtttcttcggcatcggcgaaatcgccgcgccaggc
cggctgacgccgcgccgcctgatagcggaaccgcgtgcctga
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