Candidatus Sodalis pierantonii: SOPEG_2049
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Entry
SOPEG_2049 CDS
T03006
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pes
Candidatus Sodalis pierantonii
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pes03032
]
SOPEG_2049 (ihfB)
03036 Chromosome and associated proteins [BR:
pes03036
]
SOPEG_2049 (ihfB)
03400 DNA repair and recombination proteins [BR:
pes03400
]
SOPEG_2049 (ihfB)
DNA replication proteins [BR:
pes03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SOPEG_2049 (ihfB)
Chromosome and associated proteins [BR:
pes03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SOPEG_2049 (ihfB)
DNA repair and recombination proteins [BR:
pes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SOPEG_2049 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
AHF73970
UniProt:
W0HP63
LinkDB
All DBs
Position
2148760..2149044
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQHAHIQAKVVEDAVKEMLEHMATTLASGERIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgagcttattgaaagactagctggccagcacgctcatatccaggcaaaa
gtggttgaggatgcagtgaaagagatgcttgagcatatggcgacgacgctcgccagcggc
gagcgcatcgaaatccgcggtttcggcagtttttctctccactaccgtgccccgcgcgtc
ggccgcaatccgaaaaccggtgataaagtggagctggaaggcaaatatgttccgcatttt
aaacccggtaaagagttgcgcgatcgcgccaacatctacggctaa
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