Candidatus Sodalis pierantonii: SOPEG_3005
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Entry
SOPEG_3005 CDS
T03006
Symbol
dapE
Name
(GenBank) N-succinyl-L-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes00300
Lysine biosynthesis
pes01100
Metabolic pathways
pes01120
Microbial metabolism in diverse environments
pes01230
Biosynthesis of amino acids
Module
pes_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SOPEG_3005 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pes01002
]
SOPEG_3005 (dapE)
Enzymes [BR:
pes01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SOPEG_3005 (dapE)
Peptidases and inhibitors [BR:
pes01002
]
Metallo peptidases
Family M20
SOPEG_3005 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AHF74497
UniProt:
W0HPU0
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All DBs
Position
3231855..3232982
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AA seq
375 aa
AA seq
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MSCPILELAQQLIKRPSLSPDDAGCQAIIAARLRALGFTIEPMPFGDTLNIWAWRGEGPT
LAFAGHTDVVPTGETQHWDNPPFEPTLHDSLLYGRGAADMKGSLAAMVVAAERFVAQHPH
HQGRLAFLITSDEEADARDGTVKVVEVLMARQERLDYCLVGEPSSSRQVGDIIKNGRRGS
LTANMVVQGVQGHVAYPHLAENPVHRAMGALKELVATRWDEGNEFFPPTTMQIANIHAGT
GSNNVIPGELQVQFNFRFSTELSDATIRQRVEALMQQHGLRYRIDWSLSGQPFLTARGEL
VDAAVRAVEHYQELTPRLETTGGTSDGRFIARMGAQVVELGPVNATIHKVNECVSAADLQ
LLSRMYQRIMEQLVL
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcccatattggaactcgcgcagcaattaattaaacgcccctccttaagccct
gatgacgccggctgccaggcgatcatagcggcgcgcctgcgggcgctgggtttcaccatt
gaaccgatgccgttcggcgacacccttaacatctgggcctggcgcggcgagggccccacc
ctggccttcgccggccataccgatgtggtgccgaccggcgagacacaacattgggataac
ccgccgttcgagccgacgttacatgacagcctgctctacggccgcggcgcggcggatatg
aaaggatcgctggccgccatggtggtcgccgccgaacggtttgtcgctcaacatccgcat
catcagggccggctggcgtttctgatcacctccgatgaggaagccgacgcgcgcgacggc
acggtcaaagtggtggaagtgttgatggcccgtcaggaacggctggactattgcctggtg
ggcgagccgtccagcagccgtcaggtcggtgatatcatcaaaaacggccggcgcggctcg
ctcaccgccaatatggtggtgcagggcgtacagggtcatgtcgcctatccgcatctggcg
gagaaccccgtgcatcgcgcgatgggcgcgctgaaggaactggtggcaacccggtgggac
gagggcaatgaatttttcccgcccacgacgatgcaaatcgccaatattcatgccggtacc
ggcagcaacaatgtcattcccggcgagttacaggtgcaattcaattttcgtttcagtacc
gagctctctgacgccaccattcgtcagcgggtagaagcattgatgcagcaacatgggctg
cgctatcgcattgactggtcgctatccggccagccgttcctgaccgcgcgcggcgagctg
gtggacgcggcggtgcgcgcggtggaacactatcaggagttaacgccgcgcctggaaacc
accggcggcacctccgatggccggttcatcgcccgcatgggcgcacaggtggtggagctc
ggcccggtcaacgccaccattcataaagtcaacgagtgcgtaagcgcagccgatttgcaa
ctgttgagccggatgtaccagcgcatcatggaacaattggttctatga
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