Candidatus Sodalis pierantonii: SOPEG_3358
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Entry
SOPEG_3358 CDS
T03006
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes03030
DNA replication
pes03410
Base excision repair
pes03420
Nucleotide excision repair
pes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOPEG_3358 (polA)
03410 Base excision repair
SOPEG_3358 (polA)
03420 Nucleotide excision repair
SOPEG_3358 (polA)
03440 Homologous recombination
SOPEG_3358 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pes03032
]
SOPEG_3358 (polA)
03400 DNA repair and recombination proteins [BR:
pes03400
]
SOPEG_3358 (polA)
Enzymes [BR:
pes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOPEG_3358 (polA)
DNA replication proteins [BR:
pes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SOPEG_3358 (polA)
DNA repair and recombination proteins [BR:
pes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SOPEG_3358 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOPEG_3358 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
AHF74696
UniProt:
W0HLC1
LinkDB
All DBs
Position
complement(3630962..3633748)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIAENPLILVDGSSYLYRAYHAFPPLTNSGGEPTGAMYGVLNMLKSLLVQYRPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRSQIAPLHEMVKAMGLPLLAISGVEADDVIGT
LALAAARDGHDVLISTGDKDMAQLVSPKITLINTMSNTILGPEEVQLKFGVPPELIIDYL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLEILYQQLDSVSILSFRGAKTMAAKLEQHR
EVAFLSYQLATIKTDVALDLPYDQLTVEEPEAEALMLLFQRYEFKRWLSDLEAGKWLQGR
KSAVAPSSPFTAPRLAAAEAPAEALSKDGYQIIYDMATLEQWITAIRSAGVFAFDTETDG
LDTLTANLVGLCFAVKPGEAAYLPVGHDYLDAPDQLDRAAVLALLKPVLEDAAIGKIGQN
LKFDRGVLKRYDIELAGIAFDTMLESYVLDSVAGRHGMDSLADRFLQHTTVSFEEIAGKG
RNQLTFNQIALEQAAPYAAEDADVTLRLHQTLWPRIEQAPELKKVFQEIEMPLVPVLSRI
ERTGVLIDENILAAHSVELTKRLKALELEAHQLAEEPFNLSSTKQLQAILYDKQKLPVLK
KTPGGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPQMINPVSKRVHTSYH
QAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPPDALIVAADYSQIELRIMAHLAHD
PGLLNAFAAGKDIHRATAAEVFGMPLEKVTQDQRRSAKAINFGLIYGMSAFGLARQLSVP
RSEAQKYMNLYFERYPGVLDYMERTRRQATDQGYVATLDGRRLYLPDIHSRNGMRKKGAE
RAAINAPMQGTAADIIKRAMIAIDGWLQQEAPPVRMIMQVHDELVFEVQRDAVESAKARI
KALMEGCFTLDVPLQVDVGVGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcaaatcgcagaaaacccgttaatcctggtggatggttcttcttatctttaccgc
gcctatcatgcctttccgccgctgaccaatagcgggggggaacccacgggggcgatgtac
ggcgtattgaatatgcttaaaagcctgctggtgcaataccgaccaagccatgtggcagtg
gtgtttgatgccaagggcaagacctttcgcgatgaattgtttgagcactacaaatcccac
cggccgcccatgccggacgatctgcgcagccagatagcgccgctgcatgagatggtcaag
gcgatggggctgccgttgctggctatcagcggcgtcgaggccgatgatgttatcggtacg
ctggcgctggcggcggcgcgcgacggccacgacgtgctgataagcaccggtgataaagac
atggcgcagctggtgtcgcccaaaattaccctgatcaataccatgtcgaacaccatcctc
ggtccggaagaggtgcaattgaaattcggcgtgccgcccgagcttatcatcgactatctg
gcgctgatgggcgatagctcggataatattccgggcgtgccgggagtaggggagaaaacc
gcgcaggcgctattgcaggggttaggggggctggaaatcctgtatcaacagcttgatagc
gtcagcatcttgagcttccgcggcgccaaaaccatggccgccaaactcgagcagcaccgc
gaggtggctttcctctcctaccagttggcgacgattaaaaccgatgtggcgctggattta
ccctatgaccagctaacggttgaagagcccgaggccgaagcgctgatgctgttatttcag
cgttatgaatttaaacgctggttgagcgacctagaagcgggtaaatggctacagggccgc
aaaagcgccgtcgcgccgtcttcgccctttaccgcgcctcgcctggccgcagcggaggcg
ccggctgaggcactgtcaaaagacggctatcagatcatttacgacatggcgacgcttgag
cagtggattaccgctattcgcagcgccggcgtgttcgccttcgataccgaaaccgatggg
ctggatacgctgaccgccaatttggtggggctgtgctttgccgtgaagccgggtgaagct
gcctacctgccggtggggcatgactatctggatgcgccggaccagcttgaccgcgcggcg
gtactggcattgttgaaaccggtgctggaagatgccgccatcggcaaaatcggccagaac
ctcaaattcgaccgcggggtattaaaacgatacgacattgagttggccggcatcgcattc
gataccatgctggaatcctacgtgctggacagcgtcgccggccgccacggtatggacagc
ctggcggaccgttttttacaacacaccaccgtgagctttgaggagatcgcgggtaaaggg
cgcaaccagttgacgttcaaccagatcgctttggaacaggccgccccctacgccgccgaa
gacgccgatgtgacgctgcgtttgcatcagacgctgtggccgcgcattgagcaagcgccg
gagctgaaaaaggtctttcaggaaattgaaatgccgctggtgccggtcctgtcgcgcatt
gagcgcaccggtgtgctcattgacgaaaacattctcgccgcgcattcggtggagctgacc
aaacgtctgaaagcgctggaactggaagcgcatcagctggctgaagaaccgttcaatctt
tcctctaccaaacagctgcaggcgattttatacgataaacagaagctgccggtgctgaaa
aaaacgcccggcggtgccccttccaccaatgaagaggtgctggcggagctggcgctggat
tacccgctgccgaagctgattttggaataccgcggcctggccaagcttaaatctacctac
accgataaactaccgcagatgattaacccggtgtcgaaacgggtgcatacctcctatcat
caggccgttaccgctaccggacgactatcttcgagcgatccgaacctgcaaaatattccg
gtgcgtaatgatgagggacggcgtatacgccaggcatttatcgcgccgccggatgcgctt
atcgtggcggcggactattcgcagattgagctgcgcatcatggcgcatctcgcgcacgat
cccggattgctgaacgcctttgccgccggcaaggatattcaccgcgccaccgccgccgag
gtcttcgggatgccgctggagaaggtgacacaggatcagcgccgcagcgccaaggctatc
aactttggcttgatttacggcatgagcgcctttggtctggcgcgtcagctgtcggtgccg
cgttcggaggcgcagaaatatatgaatctttatttcgagcggtaccccggcgttttggac
tatatggaacgcacccgcaggcaggcgaccgatcaaggttatgtcgccaccctggacggg
cgccggctttatttgccggatattcactcgcgcaacggcatgcgcaaaaaaggcgcggag
cgcgcggccattaatgcgcctatgcagggcaccgccgccgatattatcaaacgagcgatg
attgcgatcgatggctggttgcagcaggaggcgccgccggttcgcatgattatgcaggtt
catgatgagttggtgtttgaggtgcaaagggatgcggtagagagcgccaaagcgcggatt
aaggcgctgatggagggatgttttacgctggatgtgccgttgcaggtggacgtaggggtc
ggtgaaaactgggatcaagctcactaa
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