Candidatus Sodalis pierantonii: SOPEG_3409
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Entry
SOPEG_3409 CDS
T03006
Symbol
ygdH
Name
(GenBank) Decarboxylase family protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes00230
Purine metabolism
pes00240
Pyrimidine metabolism
pes01100
Metabolic pathways
pes01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SOPEG_3409 (ygdH)
00240 Pyrimidine metabolism
SOPEG_3409 (ygdH)
Enzymes [BR:
pes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
SOPEG_3409 (ygdH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
AHF74734
UniProt:
W0HLL8
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All DBs
Position
3689486..3690850
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AA seq
454 aa
AA seq
DB search
MITHISPLGSMDLLSQLEVDMLKRTASSDLYRLFRNCSLAVLNSGIQTDSSKELLERFQD
FDINVLRRERGVKLELVNPPEEAFVDGRIIRSLQANLFAVLRDILFVNGQIASAGRHQHL
NLANASHITNLVFSILRNARALHVGEAPNMIVCWGGHSINENEYRYARAVGNQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQHYKEGRFIGMTEPSIIAAEPPNGLVNELVIMPDIEK
RLEAFVRLGHGIIIFPGGVGTAKEFLHLLGIMMDPENADQMLPLVLTGPEESADYFRVLD
EFIVSTLGPQARRYYSIIIDDTAEVARRMKKAMPEVQENRRRSGDAYGFNWSLRIAHDLQ
HPFEPSHENMANLNLHREQPAERLAAALRRAFSGIVAGNVKEYGIHAIEQYGPYQLHGDA
EIMRHMDTLLQGFVAQHRMKLPGSAYLPCYEIRI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacgcatatcagcccgctgggctccatggatttattgtcacaactcgaagtggac
atgctcaaacgtaccgccagcagcgatctctaccggctgtttcgcaactgttcgctggcg
gtgctcaattccgggatccagaccgacagcagtaaagagctgcttgagcgctttcaggat
tttgatattaacgtgctgcgccgcgagcgcggcgtgaagttggaactggtgaacccgccg
gaagaagcatttgtcgatggccgcatcattcgctcgctgcaggccaacctgtttgccgta
ttgcgggatatcctgttcgttaacggccaaatcgccagcgccgggcggcatcaacatctc
aatctggccaacgcctcccatatcaccaatctggtattttccatcctgcgcaacgcccgc
gcgctgcacgtgggcgaggcgccaaatatgattgtctgctggggcgggcattccatcaac
gaaaacgaatatcgctatgcccgcgccgtcggcaatcagcttggcctgcgcgagctcaac
atttgcaccggctgcgggccgggcgcgatggaagcccccatgaagggcgccgcggtgggc
catgcccagcagcactataaagaggggcggtttatcgggatgaccgaaccctccattatc
gccgccgaaccgcccaacggcctggtgaatgagctggtgatcatgccggatattgaaaaa
cgcctcgaagctttcgtgcgccttggccacggtatcatcattttccccggcggcgtcggc
accgcgaaagagttcctgcatctgctgggcatcatgatggatccggaaaacgccgatcag
atgctgccgctggtgcttaccggaccggaggagagcgccgactatttccgcgtgctggat
gaatttatcgttagcacgctcggcccccaggcccgccgctattattccataatcatcgat
gataccgctgaagtggcccgccggatgaaaaaggcgatgccggaggtccaagaaaatcgc
cgccgcagcggcgatgcttacggcttcaactggtcgttgcgcatcgcccatgatttgcag
catcccttcgagcccagccatgaaaatatggccaacctcaatctgcaccgcgaacagccg
gccgaacgcctggcggccgcgctgcgccgtgccttctccggcatcgtcgccggcaacgta
aaggagtatggcattcacgctatcgagcagtacgggccttaccaactgcatggcgatgcg
gaaatcatgcggcatatggatacgctactgcagggtttcgttgcccagcaccggatgaag
ctgcccggcagcgcctacctcccctgctatgaaatccgtatttaa
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