Candidatus Sodalis pierantonii: SOPEG_3472
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Entry
SOPEG_3472 CDS
T03006
Name
(GenBank) spermidine/putrescine ABC transporter periplasmic substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOPEG_3472
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pes02000
]
SOPEG_3472
Transporters [BR:
pes02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SOPEG_3472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AHF74770
UniProt:
W0HRD3
LinkDB
All DBs
Position
complement(3770304..3771350)
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AA seq
348 aa
AA seq
DB search
MTTLRSKWIIAGVLAAVCLASTARAADEMMFASWGGAYQDGIRAAWIKPFSEQTGIDVQE
DTNPVIARIKAMVDTHRVEWDVVTAGGASLMQGAQSGLFEKITPAMVDESKVLLQARNDY
GVPSEIFSTVIGYSTQAFPQGGPKTFADFFDVKKFPGKRSLPAKPDTVLEAALMADGVAA
KDVYKTLSTEAGMARVLNKIRQIKPYVAMWWSFGAQPVQALASGEVVMALGWNGRFQSGI
DEGQPIAMSWGQSVAQVGYFMIVKGAPNKAAAVKFLSYIIKPEVQARFSHYVAYGPVTPA
SIALIDPARTERLPSTPERLANALFLDIGWWADHSLAAGEAYNAMMQE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccttacgcagtaagtggataatcgccggggtgctggcggcggtgtgcctcgcc
tctacggcccgtgcggccgatgagatgatgttcgccagctggggcggcgcttatcaagac
ggtatccgcgcggcctggatcaaaccattcagcgagcagaccggcattgacgtgcaagaa
gacaccaatcccgttatcgcccgcatcaaagccatggtggatacccatcgcgtcgagtgg
gacgtcgtgaccgccggcggcgccagcctgatgcagggggcgcaaagcggtctgtttgag
aagataactcccgccatggtggatgaaagcaaggtgctgctccaggcgcgcaatgattat
ggtgtgccgtcggagattttctctacggtaatcggctattccacgcaggcctttcctcag
ggcggtccgaaaacctttgccgacttttttgatgtgaaaaaattccctggtaagcgttcg
ctaccggcaaaaccagacacggtattggaggcggcgttgatggccgacggtgtcgcggcc
aaggatgtgtataaaacgttgagcaccgaagcgggtatggcgcgtgtgctcaataagatc
cgccaaatcaaaccttatgtcgccatgtggtggtctttcggcgctcagccggtacaggcg
ttggccagcggcgaagtggtgatggcccttggctggaatggccgctttcaatccggcatt
gatgaaggtcagcccatcgccatgagctggggccaatcggtggcgcaggtcggctatttt
atgattgtaaaaggggcgcccaataaggctgcggcggtgaaatttctcagttacatcatt
aagcccgaggtgcaggctcgcttcagccactatgttgcctatgggccggtgacgcccgcc
tcgattgcgcttatcgatcccgcccgcaccgaacgactgccgtccacgccagaacggttg
gcgaatgcactttttctcgatattggctggtgggctgatcattctctggccgccggggaa
gcctacaacgcgatgatgcaggaatag
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