Candidatus Sodalis pierantonii: SOPEG_4021
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Entry
SOPEG_4021 CDS
T03006
Symbol
ispA
Name
(GenBank) Geranyltranstransferase (farnesyldiphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pes
Candidatus Sodalis pierantonii
Pathway
pes00900
Terpenoid backbone biosynthesis
pes01100
Metabolic pathways
pes01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pes00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SOPEG_4021 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pes01006
]
SOPEG_4021 (ispA)
Enzymes [BR:
pes01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SOPEG_4021 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SOPEG_4021 (ispA)
Prenyltransferases [BR:
pes01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SOPEG_4021 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
DUF1776
Motif
Other DBs
NCBI-ProteinID:
AHF75062
UniProt:
W0HRC4
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All DBs
Position
4364196..4365098
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AA seq
300 aa
AA seq
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MIDFARTLEDSRQQVDAALEHYLHTLTRQQAPLVQAMRHGALLGGKRLRPFLVYQTGRLF
GLTPASLDAPASAIECIHAYSLIHDDLPAMDNDAQRRGLPTCHVKFGETTAILAGDALQT
LAFSILADAEIPEVSAQDRLQMISTLAAASGADGMCLGQALDLAAEGQQVSAARLETIHR
HKTGALIRAAVRMGALAAGERGGPALGYLDRFAAAIGLAFQVQDDILDVVGDSQTTGKRQ
GADQELGKSTYPALLGLDMARAKAQDLYHESLASLECVAALGYDTATLVALARYIIERDK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttcgcccgcacgttagaagatagccgccagcaggtggatgcggcgttggaa
cactatctgcacacccttacccgccagcaggcgccgcttgtccaggccatgcgccacggc
gctctgctggggggcaaacggctgcggccctttttggtttatcagaccggccggctattc
ggactcacgcccgcaagccttgacgcgccggcgagcgcgattgagtgtatccatgcctat
tcgctgattcatgacgatctgccggcgatggataacgatgcgcagcgccgcggtttgcca
acctgccacgtcaaattcggtgaaactaccgccattctggccggtgatgcgctgcaaacg
ctggctttcagcatcctggccgatgcggaaatacctgaggtcagcgcacaggataggctg
caaatgatctcgaccctggccgccgccagcggcgccgacggcatgtgcctcgggcaggcg
ctcgatttggcggcggagggtcagcaggtatccgccgcacgtctggagacgattcaccgg
cacaagaccggcgcccttatccgcgccgcggtgcggatgggcgcgctggcggccggcgaa
cgcggcggcccggcgctgggctatctcgatcgtttcgctgccgccatcggcctggctttc
caggtacaagacgatattcttgatgtcgtgggcgacagccaaaccaccggcaagcggcag
ggagcggaccaggaattaggcaaaagtacctatccggccctgctgggactggacatggcg
cgggccaaggctcaggatctgtatcacgaatcgctagcatccttagaatgtgtcgccgca
ctcggttatgataccgccacgctggtggcgctggcgcgctatattattgaacgtgacaaa
taa
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