Peribacillus sedimenti: V1500_00125
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Entry
V1500_00125 CDS
T11238
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03030
DNA replication
pesi03430
Mismatch repair
pesi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V1500_00125 (dnaX)
03430 Mismatch repair
V1500_00125 (dnaX)
03440 Homologous recombination
V1500_00125 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pesi03032
]
V1500_00125 (dnaX)
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_00125 (dnaX)
Enzymes [BR:
pesi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V1500_00125 (dnaX)
DNA replication proteins [BR:
pesi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V1500_00125 (dnaX)
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V1500_00125 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
DnaX_C
AAA_22
AAA_30
AAA_5
TIP49
AAA_assoc_2
PIF1
AAA_19
AAA_16
Mg_chelatase
FlxA
Csm1_N
TsaE
AAA_7
nSTAND3
Rad17
Spc24
Knl1_RWD_C
DUF815
AAA_2
RNA_helicase
DUF3251
AAA_28
AAA_18
GPS2_interact
CEP44
DUF4972
Motif
Other DBs
NCBI-ProteinID:
XNY92383
LinkDB
All DBs
Position
26579..28267
Genome browser
AA seq
562 aa
AA seq
DB search
MGYQALYRVWRPQQFIDVVGQEHVTKTLQNAIAQQKVSHAYLFSGPRGTGKTSAAKILAK
AVNCENPIGSEPCNECPACKGITDGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPNAVRF
KVYIVDEVHMLSQGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRIQA
QDIVGRMSQIASETGVAFNEQAMHIIARAAEGGMRDALSLLDQAISFSEDEVTVEDALTV
TGSVSQAFLSRLANAIYEKDVASSLQTLEELLSMGKDPSRFIEDMILFFRDMLLYQSAPS
LANSFERVLIDPQFKELAGIMPADYIYAVIDEFNKTQQEMKWTNHPRVFLEVMLVKLCHH
ETRGNNVSDSEIQQLQEQISSLEKQVQELKEKGVSVAVEEKAAPVQKAQRATKKAYRAPA
GKITQILRSATKPDLNALKSKWGEVLEQLGQQNLKSLAALLNEAEPVAASSTAFVLKFKY
DIHCQMAMENARFIEVMASILQRITGNAKEMAGVPDSQWQQIREEFLATQNNDTPSAEKQ
EEDPFIAEARKLVGDDLLEIKQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgggttatcaagcattatatcgagtgtggcggccacagcaatttattgatgtcgtcggg
caggaacatgtaaccaaaactttacagaatgcgattgcacagcaaaaggtttcccatgcc
taccttttttccgggccgcgtgggacaggaaaaaccagtgcggcaaaaattcttgcaaaa
gctgtaaactgcgagaatccaattggaagtgaaccgtgtaatgagtgtccggcgtgtaag
gggataacagatggctccataccggatgtaattgaaatcgacgctgcatccaacaatggt
gtagaagaaatcagagatattagggataaggttaagtatgctcctaatgctgtccggttt
aaggtatatattgtagatgaagtgcacatgctttcacaaggagcttttaatgcattgtta
aaaacattggaggagccgcctaagcatgtgatcttcatactggccacaacggaacctcac
aaaattccattaaccattatatcgcgatgccagcgctttgatttcaagcgcattcaagca
caggatattgtcggccgaatgtctcaaatagcatctgagaccggagttgcgtttaacgag
caggctatgcatattattgcaagggctgctgaaggtgggatgcgtgatgcactcagccta
ttggatcaggctatttcgttcagtgaagatgaagtgacagtcgaggatgctcttacagtt
acggggtctgtatctcaagcgtttttaagcaggcttgcaaacgcaatttatgaaaaagat
gtagcaagctcgctgcagacgctggaagaattgctttccatggggaaggatccctccaga
tttattgaggatatgattttgtttttcagggatatgcttttatatcaatcagcaccaagc
ttagcaaattcatttgaaagagtgttgatagacccgcagttcaaagaattagcaggcatt
atgcctgctgactatatatatgctgtgattgatgagtttaataagactcagcaggaaatg
aaatggacaaatcaccccagggtattcctggaggtaatgctggtgaagctgtgccatcat
gaaacaagagggaataatgtttctgatagcgaaatacagcagcttcaggagcaaatatca
agcctggaaaagcaagtgcaagagctgaaagaaaaaggggtttcagtggctgtggaagaa
aaggctgcgccagttcagaaagcccaaagagcaacgaaaaaggcatatcgtgcacctgca
gggaaaataacacagattttgcggtcggctacaaagccggacttgaatgccttaaaaagc
aaatggggcgaagtgctagaacagcttgggcagcaaaatttaaaatccttagccgcctta
ttaaatgaagctgaacctgtagctgcttcttccactgcttttgtgttaaaattcaaatat
gatattcattgtcaaatggctatggaaaatgccagatttattgaagtcatggcatctatt
ctgcagcgaattacaggaaacgcgaaagaaatggcaggtgtacctgatagccagtggcag
caaatcagagaagaattcctggctactcagaataatgacaccccttctgctgaaaaacag
gaggaagatccgtttatagctgaagcaagaaaactggtaggtgatgacctgctggaaata
aaacaataa
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