Peribacillus sedimenti: V1500_02025
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Entry
V1500_02025 CDS
T11238
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1500_02025 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pesi03019
]
V1500_02025 (groL)
03110 Chaperones and folding catalysts [BR:
pesi03110
]
V1500_02025 (groL)
03029 Mitochondrial biogenesis [BR:
pesi03029
]
V1500_02025 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pesi04147
]
V1500_02025 (groL)
Enzymes [BR:
pesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V1500_02025 (groL)
Messenger RNA biogenesis [BR:
pesi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V1500_02025 (groL)
Chaperones and folding catalysts [BR:
pesi03110
]
Heat shock proteins
HSP60 / Chaperonin
V1500_02025 (groL)
Mitochondrial biogenesis [BR:
pesi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V1500_02025 (groL)
Exosome [BR:
pesi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V1500_02025 (groL)
Exosomal proteins of other body fluids (saliva and urine)
V1500_02025 (groL)
Exosomal proteins of breast cancer cells
V1500_02025 (groL)
Exosomal proteins of colorectal cancer cells
V1500_02025 (groL)
Exosomal proteins of bladder cancer cells
V1500_02025 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XNY92677
LinkDB
All DBs
Position
368223..369854
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIE
KAVNAAIEELKAISKPIEGKASIAQVAAISSADEEVGQLIAEAMERVGNDGVITIEESKG
FTTELDVVEGMQFDRGYASPYMVTDSDKMEAVLENPYILITDKKIASIQEILPVLEQVVQ
QGKPLLLIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAALTGGEVIT
EEVGLDLKSATIQSLGRAAKVVVSKENTTIVEGAGETDKIQARVSQIRVQLEETTSEFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALLNV
YNKVSEVQAEGDEATGVNIVLRAIEEPVRQIAHNAGLEGSVIVERLKREQVGTGFNAATG
EWVNMIEAGIVDPTKVTRSALQNAGSVAAMFLTTEAVVADKPEENAGAGMPDMGGMGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatattaaatttagtgaagacgctcgccgtgccatgcttcgcggggtagat
gcccttgcgaacgctgtaaaagtaacgcttggaccaaaaggacgcaacgtggttcttgaa
aagaaattcggctcacctcttatcacaaatgacggtgtgacaatcgcaaaagaaatcgag
cttgaagatgcttttgaaaacatgggcgcgaagcttgttgctgaagttgcaagcaaaacg
aatgatgttgctggtgacggtacaactactgctactgttcttgcacaggccatgatccgt
gaaggtcttaagaacgtaactgcgggcgctaacccaatgggtatccgtaaaggtattgaa
aaagcggttaacgctgcaatcgaggaattaaaagcgatctccaagccaatcgaaggcaaa
gcttctatcgcacaagttgctgctatctcttctgctgacgaagaagttggccaactgatt
gctgaagcaatggaacgcgttggcaacgacggtgttattacaattgaagaatccaaaggc
ttcactactgaattggacgttgtagaaggtatgcaattcgaccgcggttatgcttctcct
tatatggtaactgattcagataaaatggaagcggttttggaaaatccatatatcctgatc
actgacaagaagattgcaagcatccaggaaatccttcctgttcttgagcaagtagtgcag
caaggcaagcctctattattgattgctgaagatgttgaaggtgaagcacttgcaactcta
gttgtgaataagcttcgcggaacattcaatgctgtagcagttaaggcacctggcttcggt
gaccgccgtaaggctatgctggaagacatcgctgcattaactggcggtgaagtaattact
gaagaagtcggccttgaccttaaatctgctacaattcaatcactgggccgtgcagctaag
gttgtagtttctaaagaaaacactacaatcgtagaaggtgctggagaaactgataaaatc
caggctcgcgtaagccaaatccgtgttcaattagaagaaactacttctgaatttgaccgt
gaaaagcttcaagagcgtcttgctaaattagcaggcggtgtagctgtaatcaaagttggt
gctgctacagagactgaattgaaagagcgcaagcttcgtatcgaagatgctttaaactct
actcgtgcagctgttgaagaaggtatcgtagccggtggtggtacagcacttctaaacgtg
tacaataaagtgtctgaagtccaggctgaaggagacgaagctactggtgtaaacatcgta
cttcgtgcaatcgaagagccagttcgccaaatcgctcacaacgcaggccttgaaggttct
gtaatcgttgaacgcttaaagcgcgaacaagttggcacaggcttcaatgctgctacaggc
gaatgggtaaacatgatcgaagctggtatcgttgaccctacaaaggtaactcgttcagct
cttcaaaacgctggttcagttgcagctatgttcctaacaactgaagcagttgtagctgat
aagccagaagaaaacgctggtgctggaatgcctgacatgggcggaatgggcggaatgggc
ggcatgatgtaa
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