Peribacillus sedimenti: V1500_02355
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Entry
V1500_02355 CDS
T11238
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03420
Nucleotide excision repair
pesi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1500_02355 (pcrA)
03430 Mismatch repair
V1500_02355 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_02355 (pcrA)
Enzymes [BR:
pesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1500_02355 (pcrA)
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1500_02355 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V1500_02355 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
XNY92737
LinkDB
All DBs
Position
437609..439846
Genome browser
AA seq
745 aa
AA seq
DB search
MQFLSDKLVNGLNEQQQKAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMVEKQVAPWNIL
AITFTNKAAREMKDRVRGLLGGAADEIWISTFHSMCVRILRRDIDRIGINRNFSILDTAD
QQSVIKQILKDKNMDTKKFDFRAILGTISSAKNELMSAEEFAKTAGGFYEQNVAEVYTEY
QKRLRKNQALDFDDLIMTTIQLFQRVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKQMA
SRFRNLCVVGDSDQSIYRWRGADIANILSFEKDYPNANVIFLEQNYRSTKRILQAANGVI
ENNSNRKPKKLWTENAEGNKIYYLRADSEQGEAQFVAGRIIQIVRDGSRKYSDIAILYRT
NAQSRVMEEVLLKSNIQYSIVGGTKFYDRKEIKDILAYLRLIANPDDDISLRRIVNVPKR
GVGASSLDKIADYALMNDLSMFQALQEIEQIPVSAKVSKALKEFRSLIENYTNMQEYLSV
TELVEEVLEKSGYREMLEAEKSLESQSRIENIDEFLSVTKNFEEKNDDKSLVAFLTDLAL
VADIDSLDEKEEAQDTVTLMTLHSAKGLEFPVVFLLGLEEGVFPHTRSLMDEEEMEEERR
LAYVGITRAENELYMTNAQMRTLFGRTNMNPVSRFISEIPEDLLEDLMPKKKQPSFMSSG
SAASSGYASSPARQRALGRAVSTPSTTGGDEIGWRVGDKASHKKWGIGTVVSVKGEGEGK
ELDIAFPSPTGIKRLLAKFAPIEKA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttatctgataaattggttaatggattaaatgagcagcagcaaaaggctgtg
aaagctaccgatggcccgctattaatcatggcgggggccggcagcggcaagacccgtgtc
cttactcatcgaatcgcctatttaatggtcgaaaaacaggtcgctccctggaacatcctg
gccattacgtttacgaataaagcagcgcgtgagatgaaggacagggtccggggactgctt
ggaggcgcagcggatgaaatttggatttcaacgttccactccatgtgcgtacgtatctta
cggcgtgacatcgatagaatcgggattaaccggaacttctcgatcttggatacagcagat
cagcagtcagtgattaaacagattttaaaagataagaatatggatacgaagaagtttgat
tttcgagctattctgggaacgatcagctctgcaaaaaacgagctgatgagcgcagaggaa
tttgccaagacagccggcggtttctatgagcagaatgtggccgaagtctatacggaatac
cagaagcgtctgcgcaagaaccaggccctggattttgatgatttaatcatgacgacgatc
cagctattccagcgtgtgccagaggttttagagtactatcagcgcaaattccaatatata
cacgtggatgagtatcaggatacaaaccgtgcacagtatatgcttgtcaagcagatggct
tcccggttccgcaatctttgcgtagtgggtgattccgaccagtcgatctatcgctggagg
ggagcggatattgccaatatcctttcatttgaaaaggattacccaaatgcgaatgtgatc
ttcctggagcagaattatcgctctacaaaaagaatcctccaggctgcaaacggggtcata
gaaaataacagcaatcgtaaaccaaagaagctgtggactgaaaatgcagaaggcaataaa
atttactatttacgtgcagacagtgaacagggtgaagcccaatttgtagctggaagaatt
attcagatcgtccgggatggttctcgcaaatattcggatatcgcgattctataccgtacg
aacgcccagtcccgtgttatggaggaagtattgctgaaatccaacatccagtacagcatt
gtgggcggcactaagttctacgaccgcaaagagatcaaggatatccttgcgtatctccgc
cttattgccaaccccgacgatgatatttcgcttcgccgaatcgtaaacgtaccgaagcgc
ggtgtaggtgcatcctcacttgataagattgccgattacgcactgatgaatgatttatcc
atgttccaggcacttcaggaaatcgagcaaattccagtgagcgctaaagtctcaaaggcg
ttgaaagaattccgttcccttattgaaaactatacaaatatgcaggagtatttgtctgtt
acagaactagtcgaggaagtgctggagaaatccggttaccgtgaaatgctcgaggccgag
aaatcgctcgaatcacagagccgcattgaaaatatcgacgaattcctgtctgttaccaaa
aatttcgaagaaaagaatgatgataaatcattggttgctttcctaaccgaccttgctctt
gtcgcagacatcgatagcctggatgagaaagaggaagcacaagatacagtaacattgatg
accttgcattctgccaaagggcttgagttcccggttgtattcctgcttgggcttgaggaa
ggagtctttccgcatacccgctcacttatggacgaggaagagatggaagaggaacggcgg
ctggcatatgtgggaatcacacgtgctgaaaatgagctttatatgactaatgcgcagatg
cggactctttttgggcgtacgaatatgaatcctgtgtcccgcttcatctccgaaattccg
gaggatctgcttgaggatttaatgccgaagaaaaagcagccatccttcatgtcttcgggt
tctgctgcgtcttccggctatgcatcttcacctgcaaggcaaagggcattgggacgggca
gtttccacaccttccacaacgggcggagatgagattggctggcgagtcggcgataaagcc
tctcacaaaaagtggggcattggcacagtagtcagcgtcaaaggagaaggggaaggaaaa
gagcttgatattgcattcccaagtccaacaggtatcaagcgtctccttgcaaagtttgca
ccaatagaaaaggcgtaa
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